Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.65□□□□□ -0.06
LCMT2O60294 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LCMT2O60294 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LCMT2O60294 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LCMT2O60294 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LCMT2O60294 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LCMT2O60294 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LCMT2O60294 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LCMT2O60294 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LCMT2O60294 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LCMT2O60294 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LCMT2O60294 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.65□□□□□ -0.06
LCMT2O60294 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.65□□□□□ -0.06
LCMT2O60294 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
LCMT2O60294 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
LCMT2O60294 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LCMT2O60294 NME2P1-201ENST00000426182 414 ntBASIC14.65□□□□□ -0.06
LCMT2O60294 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.65□□□□□ -0.06
LCMT2O60294 INE1-201ENST00000456273 945 ntBASIC14.65□□□□□ -0.06
LCMT2O60294 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.65□□□□□ -0.06
LCMT2O60294 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LCMT2O60294 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
LCMT2O60294 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LCMT2O60294 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.65□□□□□ -0.06
LCMT2O60294 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LCMT2O60294 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.65□□□□□ -0.06
LCMT2O60294 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.65□□□□□ -0.06
LCMT2O60294 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.65□□□□□ -0.06
LCMT2O60294 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.65□□□□□ -0.06
LCMT2O60294 MSTO2P-201ENST00000314835 1709 ntBASIC14.65□□□□□ -0.06
LCMT2O60294 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LCMT2O60294 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
LCMT2O60294 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LCMT2O60294 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.65□□□□□ -0.06
LCMT2O60294 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LCMT2O60294 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
LCMT2O60294 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LCMT2O60294 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LCMT2O60294 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.65□□□□□ -0.06
LCMT2O60294 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.65□□□□□ -0.06
LCMT2O60294 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LCMT2O60294 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LCMT2O60294 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
LCMT2O60294 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
LCMT2O60294 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.65□□□□□ -0.06
LCMT2O60294 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LCMT2O60294 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LCMT2O60294 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LCMT2O60294 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
LCMT2O60294 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
LCMT2O60294 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
LCMT2O60294 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LCMT2O60294 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LCMT2O60294 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LCMT2O60294 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
LCMT2O60294 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LCMT2O60294 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LCMT2O60294 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LCMT2O60294 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
LCMT2O60294 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
LCMT2O60294 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
LCMT2O60294 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LCMT2O60294 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.64□□□□□ -0.07
LCMT2O60294 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LCMT2O60294 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
LCMT2O60294 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
LCMT2O60294 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LCMT2O60294 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LCMT2O60294 TNRC18P2-201ENST00000417666 2714 ntBASIC14.64□□□□□ -0.07
LCMT2O60294 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.64□□□□□ -0.07
LCMT2O60294 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.64□□□□□ -0.07
LCMT2O60294 AL645937.2-201ENST00000396808 931 ntBASIC14.64□□□□□ -0.07
LCMT2O60294 COX5BP8-201ENST00000416911 349 ntBASIC14.64□□□□□ -0.07
LCMT2O60294 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.64□□□□□ -0.07
LCMT2O60294 HLA-K-203ENST00000430151 1046 ntBASIC14.64□□□□□ -0.07
LCMT2O60294 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LCMT2O60294 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LCMT2O60294 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.64□□□□□ -0.07
LCMT2O60294 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
LCMT2O60294 AP001063.1-201ENST00000568332 529 ntBASIC14.64□□□□□ -0.07
LCMT2O60294 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.64□□□□□ -0.07
LCMT2O60294 AC010319.3-201ENST00000597028 470 ntBASIC14.64□□□□□ -0.07
LCMT2O60294 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.64□□□□□ -0.07
LCMT2O60294 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.64□□□□□ -0.07
LCMT2O60294 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.64□□□□□ -0.07
LCMT2O60294 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.64□□□□□ -0.07
LCMT2O60294 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
LCMT2O60294 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LCMT2O60294 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LCMT2O60294 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
LCMT2O60294 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
LCMT2O60294 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.64□□□□□ -0.07
LCMT2O60294 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.64□□□□□ -0.07
LCMT2O60294 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LCMT2O60294 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.64□□□□□ -0.07
LCMT2O60294 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LCMT2O60294 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LCMT2O60294 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.64□□□□□ -0.07
LCMT2O60294 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
LCMT2O60294 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms