Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 TPM3P8-201ENST00000330554 643 ntBASIC15.18■□□□□ 0.02
TLR4O00206 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TLR4O00206 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TLR4O00206 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.18■□□□□ 0.02
TLR4O00206 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TLR4O00206 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TLR4O00206 AC245100.3-201ENST00000441281 285 ntBASIC15.18■□□□□ 0.02
TLR4O00206 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
TLR4O00206 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.18■□□□□ 0.02
TLR4O00206 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.18■□□□□ 0.02
TLR4O00206 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
TLR4O00206 C2orf69P2-201ENST00000562032 1123 ntBASIC15.18■□□□□ 0.02
TLR4O00206 AC023824.1-201ENST00000562945 2975 ntBASIC15.18■□□□□ 0.02
TLR4O00206 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.18■□□□□ 0.02
TLR4O00206 RN7SL48P-201ENST00000579283 293 ntBASIC15.18■□□□□ 0.02
TLR4O00206 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.18■□□□□ 0.02
TLR4O00206 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.18■□□□□ 0.02
TLR4O00206 AL022328.3-201ENST00000607943 679 ntBASIC15.18■□□□□ 0.02
TLR4O00206 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.18■□□□□ 0.02
TLR4O00206 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.18■□□□□ 0.02
TLR4O00206 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.18■□□□□ 0.02
TLR4O00206 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TLR4O00206 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TLR4O00206 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.18■□□□□ 0.02
TLR4O00206 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TLR4O00206 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TLR4O00206 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TLR4O00206 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TLR4O00206 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TLR4O00206 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TLR4O00206 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TLR4O00206 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TLR4O00206 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.17■□□□□ 0.02
TLR4O00206 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
TLR4O00206 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TLR4O00206 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.17■□□□□ 0.02
TLR4O00206 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TLR4O00206 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TLR4O00206 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TLR4O00206 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TLR4O00206 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TLR4O00206 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TLR4O00206 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TLR4O00206 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.17■□□□□ 0.02
TLR4O00206 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TLR4O00206 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TLR4O00206 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TLR4O00206 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
TLR4O00206 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TLR4O00206 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TLR4O00206 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
TLR4O00206 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.17■□□□□ 0.02
TLR4O00206 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TLR4O00206 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.17■□□□□ 0.02
TLR4O00206 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.17■□□□□ 0.02
TLR4O00206 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.17■□□□□ 0.02
TLR4O00206 ZNF767P-206ENST00000513792 565 ntBASIC15.17■□□□□ 0.02
TLR4O00206 AP001258.2-201ENST00000529891 490 ntBASIC15.17■□□□□ 0.02
TLR4O00206 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.17■□□□□ 0.02
TLR4O00206 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.17■□□□□ 0.02
TLR4O00206 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.17■□□□□ 0.02
TLR4O00206 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.17■□□□□ 0.02
TLR4O00206 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.17■□□□□ 0.02
TLR4O00206 PRSS30P-206ENST00000641773 873 ntBASIC15.17■□□□□ 0.02
TLR4O00206 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TLR4O00206 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TLR4O00206 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TLR4O00206 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TLR4O00206 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TLR4O00206 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TLR4O00206 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.17■□□□□ 0.02
TLR4O00206 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TLR4O00206 AP005117.1-202ENST00000581724 1908 ntBASIC15.17■□□□□ 0.02
TLR4O00206 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.17■□□□□ 0.02
TLR4O00206 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TLR4O00206 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TLR4O00206 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.17■□□□□ 0.02
TLR4O00206 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TLR4O00206 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TLR4O00206 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TLR4O00206 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TLR4O00206 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TLR4O00206 AC148477.4-201ENST00000613430 1793 ntBASIC15.16■□□□□ 0.02
TLR4O00206 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TLR4O00206 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TLR4O00206 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TLR4O00206 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TLR4O00206 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TLR4O00206 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TLR4O00206 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
TLR4O00206 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TLR4O00206 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TLR4O00206 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TLR4O00206 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.16■□□□□ 0.02
TLR4O00206 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.16■□□□□ 0.02
TLR4O00206 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TLR4O00206 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TLR4O00206 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TLR4O00206 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TLR4O00206 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms