Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.67□□□□□ -0.38
A0A1W2PRF3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.67□□□□□ -0.38
A0A1W2PRF3 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
A0A1W2PRF3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
A0A1W2PRF3 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
A0A1W2PRF3 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
A0A1W2PRF3 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
A0A1W2PRF3 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
A0A1W2PRF3 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.67□□□□□ -0.38
A0A1W2PRF3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
A0A1W2PRF3 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC12.67□□□□□ -0.38
A0A1W2PRF3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.67□□□□□ -0.38
A0A1W2PRF3 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC12.67□□□□□ -0.38
A0A1W2PRF3 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
A0A1W2PRF3 NAA50-208ENST00000497255 789 ntTSL 5 BASIC12.67□□□□□ -0.38
A0A1W2PRF3 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
A0A1W2PRF3 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC12.67□□□□□ -0.38
A0A1W2PRF3 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.67□□□□□ -0.38
A0A1W2PRF3 AC015910.1-201ENST00000579400 975 ntBASIC12.67□□□□□ -0.38
A0A1W2PRF3 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.67□□□□□ -0.38
A0A1W2PRF3 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.67□□□□□ -0.38
A0A1W2PRF3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.67□□□□□ -0.38
A0A1W2PRF3 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.67□□□□□ -0.38
A0A1W2PRF3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.67□□□□□ -0.38
A0A1W2PRF3 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
A0A1W2PRF3 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
A0A1W2PRF3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.67□□□□□ -0.38
A0A1W2PRF3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
A0A1W2PRF3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.67□□□□□ -0.38
A0A1W2PRF3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC12.67□□□□□ -0.38
A0A1W2PRF3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
A0A1W2PRF3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
A0A1W2PRF3 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.67□□□□□ -0.38
A0A1W2PRF3 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.67□□□□□ -0.38
A0A1W2PRF3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
A0A1W2PRF3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
A0A1W2PRF3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
A0A1W2PRF3 C1R-202ENST00000536053 2347 ntTSL 2 BASIC12.67□□□□□ -0.38
A0A1W2PRF3 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
A0A1W2PRF3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
A0A1W2PRF3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
A0A1W2PRF3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
A0A1W2PRF3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.67□□□□□ -0.38
A0A1W2PRF3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
A0A1W2PRF3 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
A0A1W2PRF3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
A0A1W2PRF3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
A0A1W2PRF3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
A0A1W2PRF3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
A0A1W2PRF3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
A0A1W2PRF3 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
A0A1W2PRF3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
A0A1W2PRF3 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
A0A1W2PRF3 DKFZP434H168-201ENST00000567381 1905 ntBASIC12.66□□□□□ -0.38
A0A1W2PRF3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
A0A1W2PRF3 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
A0A1W2PRF3 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
A0A1W2PRF3 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
A0A1W2PRF3 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
A0A1W2PRF3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC12.66□□□□□ -0.38
A0A1W2PRF3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
A0A1W2PRF3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.66□□□□□ -0.38
A0A1W2PRF3 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
A0A1W2PRF3 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
A0A1W2PRF3 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
A0A1W2PRF3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.66□□□□□ -0.38
A0A1W2PRF3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.66□□□□□ -0.38
A0A1W2PRF3 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
A0A1W2PRF3 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
A0A1W2PRF3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
A0A1W2PRF3 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
A0A1W2PRF3 GK-202ENST00000378941 458 ntTSL 3 BASIC12.66□□□□□ -0.38
A0A1W2PRF3 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
A0A1W2PRF3 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
A0A1W2PRF3 SOCS2P1-201ENST00000417727 557 ntBASIC12.66□□□□□ -0.38
A0A1W2PRF3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.66□□□□□ -0.38
A0A1W2PRF3 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.66□□□□□ -0.38
A0A1W2PRF3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.66□□□□□ -0.38
A0A1W2PRF3 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.66□□□□□ -0.38
A0A1W2PRF3 AP001582.1-201ENST00000525856 295 ntBASIC12.66□□□□□ -0.38
A0A1W2PRF3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
A0A1W2PRF3 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.66□□□□□ -0.38
A0A1W2PRF3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.66□□□□□ -0.38
A0A1W2PRF3 AC120045.2-201ENST00000567334 178 ntBASIC12.66□□□□□ -0.38
A0A1W2PRF3 BRI3BPP1-201ENST00000594224 787 ntBASIC12.66□□□□□ -0.38
A0A1W2PRF3 AC010319.3-201ENST00000597028 470 ntBASIC12.66□□□□□ -0.38
A0A1W2PRF3 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.66□□□□□ -0.38
A0A1W2PRF3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
A0A1W2PRF3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
A0A1W2PRF3 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
A0A1W2PRF3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
A0A1W2PRF3 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
A0A1W2PRF3 BID-213ENST00000615414 2236 ntTSL 5 BASIC12.66□□□□□ -0.38
A0A1W2PRF3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.66□□□□□ -0.38
A0A1W2PRF3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
A0A1W2PRF3 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.66□□□□□ -0.38
A0A1W2PRF3 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.66□□□□□ -0.38
A0A1W2PRF3 ST20-AS1-201ENST00000560255 4223 ntBASIC12.66□□□□□ -0.38
A0A1W2PRF3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
A0A1W2PRF3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms