Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 AC008741.2-201ENST00000612792 3115 ntBASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 CYP2T1P-202ENST00000641596 2535 ntBASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 RPL5P21-201ENST00000404620 815 ntBASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 MPRIPP1-201ENST00000452433 1089 ntBASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 RN7SL774P-201ENST00000577467 290 ntBASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC187A0A096LP49 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 SUPT4H1P2-201ENST00000501248 353 ntBASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 MESTP3-201ENST00000503460 968 ntBASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 AC013355.1-201ENST00000562625 723 ntBASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 AL645939.5-201ENST00000606834 243 ntBASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 LINC02199-201ENST00000506655 2702 ntBASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms