Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC36.11■■■■□ 3.37
CDK11AQ9UQ88 MIR939-201ENST00000401314 82 ntBASIC36.11■■■■□ 3.37
CDK11AQ9UQ88 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC36.11■■■■□ 3.37
CDK11AQ9UQ88 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC36.11■■■■□ 3.37
CDK11AQ9UQ88 AF213884.3-201ENST00000563833 479 ntBASIC36.11■■■■□ 3.37
CDK11AQ9UQ88 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC36.11■■■■□ 3.37
CDK11AQ9UQ88 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC36.11■■■■□ 3.37
CDK11AQ9UQ88 REST-206ENST00000612429 1376 ntTSL 5 BASIC36.11■■■■□ 3.37
CDK11AQ9UQ88 REST-207ENST00000616975 1370 ntTSL 5 BASIC36.11■■■■□ 3.37
CDK11AQ9UQ88 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC36.1■■■■□ 3.37
CDK11AQ9UQ88 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC36.1■■■■□ 3.37
CDK11AQ9UQ88 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC36.1■■■■□ 3.37
CDK11AQ9UQ88 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC36.09■■■■□ 3.37
CDK11AQ9UQ88 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC36.09■■■■□ 3.37
CDK11AQ9UQ88 AC105265.2-201ENST00000467189 838 ntBASIC36.09■■■■□ 3.37
CDK11AQ9UQ88 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC36.09■■■■□ 3.37
CDK11AQ9UQ88 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC36.09■■■■□ 3.37
CDK11AQ9UQ88 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC36.08■■■■□ 3.37
CDK11AQ9UQ88 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC36.08■■■■□ 3.37
CDK11AQ9UQ88 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC36.08■■■■□ 3.37
CDK11AQ9UQ88 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC36.08■■■■□ 3.37
CDK11AQ9UQ88 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC36.07■■■■□ 3.37
CDK11AQ9UQ88 SYT6-210ENST00000641643 1587 ntBASIC36.07■■■■□ 3.37
CDK11AQ9UQ88 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC36.07■■■■□ 3.36
CDK11AQ9UQ88 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC36.07■■■■□ 3.36
CDK11AQ9UQ88 AP001330.3-201ENST00000520123 633 ntBASIC36.07■■■■□ 3.36
CDK11AQ9UQ88 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC36.07■■■■□ 3.36
CDK11AQ9UQ88 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC36.06■■■■□ 3.36
CDK11AQ9UQ88 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC36.06■■■■□ 3.36
CDK11AQ9UQ88 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC36.06■■■■□ 3.36
CDK11AQ9UQ88 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC36.06■■■■□ 3.36
CDK11AQ9UQ88 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC36.06■■■■□ 3.36
CDK11AQ9UQ88 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC36.06■■■■□ 3.36
CDK11AQ9UQ88 AC092666.2-201ENST00000613287 246 ntBASIC36.06■■■■□ 3.36
CDK11AQ9UQ88 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC36.06■■■■□ 3.36
CDK11AQ9UQ88 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC36.06■■■■□ 3.36
CDK11AQ9UQ88 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC36.06■■■■□ 3.36
CDK11AQ9UQ88 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC36.06■■■■□ 3.36
CDK11AQ9UQ88 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC36.05■■■■□ 3.36
CDK11AQ9UQ88 AC131274.2-201ENST00000580697 1507 ntBASIC36.05■■■■□ 3.36
CDK11AQ9UQ88 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC36.05■■■■□ 3.36
CDK11AQ9UQ88 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
CDK11AQ9UQ88 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC36.05■■■■□ 3.36
CDK11AQ9UQ88 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
CDK11AQ9UQ88 MIR5787-201ENST00000611784 55 ntBASIC36.05■■■■□ 3.36
CDK11AQ9UQ88 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
CDK11AQ9UQ88 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC36.04■■■■□ 3.36
CDK11AQ9UQ88 AC091305.1-201ENST00000479476 895 ntBASIC36.04■■■■□ 3.36
CDK11AQ9UQ88 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC36.04■■■■□ 3.36
CDK11AQ9UQ88 STK32C-205ENST00000456004 607 ntTSL 2 BASIC36.03■■■■□ 3.36
CDK11AQ9UQ88 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC36.03■■■■□ 3.36
CDK11AQ9UQ88 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC36.03■■■■□ 3.36
CDK11AQ9UQ88 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC36.03■■■■□ 3.36
CDK11AQ9UQ88 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC36.02■■■■□ 3.36
CDK11AQ9UQ88 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC36.02■■■■□ 3.36
CDK11AQ9UQ88 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC36.02■■■■□ 3.36
CDK11AQ9UQ88 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.36
CDK11AQ9UQ88 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC36.01■■■■□ 3.35
CDK11AQ9UQ88 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC36.01■■■■□ 3.35
CDK11AQ9UQ88 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC36.01■■■■□ 3.35
CDK11AQ9UQ88 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC36■■■■□ 3.35
CDK11AQ9UQ88 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC36■■■■□ 3.35
CDK11AQ9UQ88 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
CDK11AQ9UQ88 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
CDK11AQ9UQ88 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC36■■■■□ 3.35
CDK11AQ9UQ88 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
CDK11AQ9UQ88 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
CDK11AQ9UQ88 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC35.99■■■■□ 3.35
CDK11AQ9UQ88 MIR4767-201ENST00000582827 78 ntBASIC35.99■■■■□ 3.35
CDK11AQ9UQ88 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
CDK11AQ9UQ88 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC35.99■■■■□ 3.35
CDK11AQ9UQ88 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC35.99■■■■□ 3.35
CDK11AQ9UQ88 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC35.99■■■■□ 3.35
CDK11AQ9UQ88 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC35.99■■■■□ 3.35
CDK11AQ9UQ88 AC092803.2-201ENST00000564287 1899 ntBASIC35.99■■■■□ 3.35
CDK11AQ9UQ88 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC35.98■■■■□ 3.35
CDK11AQ9UQ88 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC35.98■■■■□ 3.35
CDK11AQ9UQ88 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC35.98■■■■□ 3.35
CDK11AQ9UQ88 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC35.98■■■■□ 3.35
CDK11AQ9UQ88 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC35.97■■■■□ 3.35
CDK11AQ9UQ88 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC35.97■■■■□ 3.35
CDK11AQ9UQ88 RBM38-205ENST00000440234 686 ntTSL 2 BASIC35.97■■■■□ 3.35
CDK11AQ9UQ88 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC35.97■■■■□ 3.35
CDK11AQ9UQ88 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC35.97■■■■□ 3.35
CDK11AQ9UQ88 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC35.97■■■■□ 3.35
CDK11AQ9UQ88 PTMA-205ENST00000410064 814 ntTSL 2 BASIC35.96■■■■□ 3.35
CDK11AQ9UQ88 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC35.96■■■■□ 3.35
CDK11AQ9UQ88 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC35.96■■■■□ 3.35
CDK11AQ9UQ88 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC35.96■■■■□ 3.35
CDK11AQ9UQ88 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC35.96■■■■□ 3.35
CDK11AQ9UQ88 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC35.96■■■■□ 3.35
CDK11AQ9UQ88 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC35.96■■■■□ 3.35
CDK11AQ9UQ88 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC35.95■■■■□ 3.35
CDK11AQ9UQ88 SERBP1P1-201ENST00000396021 1160 ntBASIC35.95■■■■□ 3.35
CDK11AQ9UQ88 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC35.95■■■■□ 3.35
CDK11AQ9UQ88 AC104564.3-201ENST00000582367 638 ntBASIC35.95■■■■□ 3.35
CDK11AQ9UQ88 AL138724.1-201ENST00000606771 1088 ntBASIC35.95■■■■□ 3.35
CDK11AQ9UQ88 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC35.94■■■■□ 3.34
CDK11AQ9UQ88 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC35.94■■■■□ 3.34
CDK11AQ9UQ88 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC35.93■■■■□ 3.34
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms