Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
PHF8Q9UPP1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
PHF8Q9UPP1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
PHF8Q9UPP1 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
PHF8Q9UPP1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
PHF8Q9UPP1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
PHF8Q9UPP1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC31.96■■■□□ 2.71
PHF8Q9UPP1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC31.96■■■□□ 2.71
PHF8Q9UPP1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
PHF8Q9UPP1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
PHF8Q9UPP1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
PHF8Q9UPP1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC31.96■■■□□ 2.71
PHF8Q9UPP1 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
PHF8Q9UPP1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC31.95■■■□□ 2.71
PHF8Q9UPP1 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC31.95■■■□□ 2.71
PHF8Q9UPP1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC31.95■■■□□ 2.71
PHF8Q9UPP1 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
PHF8Q9UPP1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC31.95■■■□□ 2.71
PHF8Q9UPP1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC31.94■■■□□ 2.7
PHF8Q9UPP1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC31.94■■■□□ 2.7
PHF8Q9UPP1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC31.94■■■□□ 2.7
PHF8Q9UPP1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
PHF8Q9UPP1 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC31.94■■■□□ 2.7
PHF8Q9UPP1 REST-206ENST00000612429 1376 ntTSL 5 BASIC31.94■■■□□ 2.7
PHF8Q9UPP1 REST-207ENST00000616975 1370 ntTSL 5 BASIC31.94■■■□□ 2.7
PHF8Q9UPP1 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC31.93■■■□□ 2.7
PHF8Q9UPP1 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
PHF8Q9UPP1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
PHF8Q9UPP1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC31.93■■■□□ 2.7
PHF8Q9UPP1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
PHF8Q9UPP1 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
PHF8Q9UPP1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
PHF8Q9UPP1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
PHF8Q9UPP1 AC099791.2-201ENST00000605725 427 ntBASIC31.92■■■□□ 2.7
PHF8Q9UPP1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
PHF8Q9UPP1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
PHF8Q9UPP1 PTCHD3P2-201ENST00000424937 1205 ntBASIC31.91■■■□□ 2.7
PHF8Q9UPP1 AC027682.1-201ENST00000562846 899 ntBASIC31.91■■■□□ 2.7
PHF8Q9UPP1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
PHF8Q9UPP1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
PHF8Q9UPP1 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC31.91■■■□□ 2.7
PHF8Q9UPP1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
PHF8Q9UPP1 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
PHF8Q9UPP1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
PHF8Q9UPP1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
PHF8Q9UPP1 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
PHF8Q9UPP1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC31.89■■■□□ 2.7
PHF8Q9UPP1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC31.88■■■□□ 2.69
PHF8Q9UPP1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
PHF8Q9UPP1 AC011298.3-201ENST00000615796 283 ntBASIC31.88■■■□□ 2.69
PHF8Q9UPP1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
PHF8Q9UPP1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC31.88■■■□□ 2.69
PHF8Q9UPP1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC31.88■■■□□ 2.69
PHF8Q9UPP1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
PHF8Q9UPP1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
PHF8Q9UPP1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
PHF8Q9UPP1 AC131274.2-201ENST00000580697 1507 ntBASIC31.87■■■□□ 2.69
PHF8Q9UPP1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
PHF8Q9UPP1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC31.87■■■□□ 2.69
PHF8Q9UPP1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
PHF8Q9UPP1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC31.87■■■□□ 2.69
PHF8Q9UPP1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC31.87■■■□□ 2.69
PHF8Q9UPP1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC31.86■■■□□ 2.69
PHF8Q9UPP1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC31.86■■■□□ 2.69
PHF8Q9UPP1 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
PHF8Q9UPP1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC31.86■■■□□ 2.69
PHF8Q9UPP1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC31.86■■■□□ 2.69
PHF8Q9UPP1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC31.86■■■□□ 2.69
PHF8Q9UPP1 AC008764.7-201ENST00000593779 1081 ntBASIC31.86■■■□□ 2.69
PHF8Q9UPP1 AL138724.1-201ENST00000606771 1088 ntBASIC31.86■■■□□ 2.69
PHF8Q9UPP1 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
PHF8Q9UPP1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
PHF8Q9UPP1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC31.86■■■□□ 2.69
PHF8Q9UPP1 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
PHF8Q9UPP1 IRS3P-201ENST00000223076 1006 ntBASIC31.85■■■□□ 2.69
PHF8Q9UPP1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC31.85■■■□□ 2.69
PHF8Q9UPP1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
PHF8Q9UPP1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC31.85■■■□□ 2.69
PHF8Q9UPP1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC31.84■■■□□ 2.69
PHF8Q9UPP1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
PHF8Q9UPP1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
PHF8Q9UPP1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
PHF8Q9UPP1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC31.83■■■□□ 2.69
PHF8Q9UPP1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC31.83■■■□□ 2.69
PHF8Q9UPP1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC31.83■■■□□ 2.69
PHF8Q9UPP1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC31.83■■■□□ 2.69
PHF8Q9UPP1 AC099791.1-201ENST00000416440 715 ntBASIC31.82■■■□□ 2.68
PHF8Q9UPP1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
PHF8Q9UPP1 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
PHF8Q9UPP1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
PHF8Q9UPP1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC31.81■■■□□ 2.68
PHF8Q9UPP1 AC009102.2-201ENST00000606772 1639 ntBASIC31.81■■■□□ 2.68
PHF8Q9UPP1 AC010501.1-201ENST00000606270 1962 ntBASIC31.81■■■□□ 2.68
PHF8Q9UPP1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
PHF8Q9UPP1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
PHF8Q9UPP1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC31.81■■■□□ 2.68
PHF8Q9UPP1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
PHF8Q9UPP1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
PHF8Q9UPP1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC31.8■■■□□ 2.68
PHF8Q9UPP1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC31.8■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms