Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
ALX4Q9H161 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ALX4Q9H161 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.47■□□□□ 0.71
ALX4Q9H161 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ALX4Q9H161 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ALX4Q9H161 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ALX4Q9H161 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ALX4Q9H161 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ALX4Q9H161 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ALX4Q9H161 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ALX4Q9H161 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ALX4Q9H161 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ALX4Q9H161 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ALX4Q9H161 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ALX4Q9H161 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ALX4Q9H161 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.46■□□□□ 0.71
ALX4Q9H161 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.46■□□□□ 0.71
ALX4Q9H161 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
ALX4Q9H161 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.46■□□□□ 0.71
ALX4Q9H161 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.46■□□□□ 0.71
ALX4Q9H161 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
ALX4Q9H161 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ALX4Q9H161 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ALX4Q9H161 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ALX4Q9H161 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALX4Q9H161 HLA-L-211ENST00000482052 1765 ntBASIC19.45■□□□□ 0.7
ALX4Q9H161 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ALX4Q9H161 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALX4Q9H161 AC148477.6-201ENST00000623746 465 ntBASIC19.45■□□□□ 0.7
ALX4Q9H161 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALX4Q9H161 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
ALX4Q9H161 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALX4Q9H161 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALX4Q9H161 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ALX4Q9H161 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.44■□□□□ 0.7
ALX4Q9H161 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.44■□□□□ 0.7
ALX4Q9H161 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALX4Q9H161 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALX4Q9H161 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ALX4Q9H161 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALX4Q9H161 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ALX4Q9H161 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ALX4Q9H161 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALX4Q9H161 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALX4Q9H161 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.44■□□□□ 0.7
ALX4Q9H161 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALX4Q9H161 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ALX4Q9H161 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ALX4Q9H161 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ALX4Q9H161 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ALX4Q9H161 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ALX4Q9H161 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
ALX4Q9H161 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.43■□□□□ 0.7
ALX4Q9H161 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ALX4Q9H161 AL359258.2-201ENST00000564063 1566 ntBASIC19.43■□□□□ 0.7
ALX4Q9H161 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.43■□□□□ 0.7
ALX4Q9H161 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ALX4Q9H161 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ALX4Q9H161 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ALX4Q9H161 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ALX4Q9H161 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ALX4Q9H161 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ALX4Q9H161 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALX4Q9H161 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALX4Q9H161 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALX4Q9H161 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALX4Q9H161 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.42■□□□□ 0.7
ALX4Q9H161 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ALX4Q9H161 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ALX4Q9H161 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALX4Q9H161 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALX4Q9H161 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALX4Q9H161 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALX4Q9H161 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ALX4Q9H161 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALX4Q9H161 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALX4Q9H161 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALX4Q9H161 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALX4Q9H161 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALX4Q9H161 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ALX4Q9H161 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ALX4Q9H161 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.41■□□□□ 0.7
ALX4Q9H161 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALX4Q9H161 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ALX4Q9H161 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALX4Q9H161 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ALX4Q9H161 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALX4Q9H161 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALX4Q9H161 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.4■□□□□ 0.7
ALX4Q9H161 ECEL1P1-201ENST00000373592 1742 ntBASIC19.4■□□□□ 0.7
ALX4Q9H161 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALX4Q9H161 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALX4Q9H161 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
ALX4Q9H161 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALX4Q9H161 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ALX4Q9H161 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALX4Q9H161 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
ALX4Q9H161 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
ALX4Q9H161 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
ALX4Q9H161 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms