Protein–RNA interactions for Protein: Q9BXL8

CDCA4, Cell division cycle-associated protein 4, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4Q9BXL8 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CDCA4Q9BXL8 MIR3648-1-201ENST00000615959 180 ntBASIC20.74■□□□□ 0.91
CDCA4Q9BXL8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CDCA4Q9BXL8 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
CDCA4Q9BXL8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDCA4Q9BXL8 DUSP8P3-201ENST00000399571 1760 ntBASIC20.74■□□□□ 0.91
CDCA4Q9BXL8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.74■□□□□ 0.91
CDCA4Q9BXL8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA4Q9BXL8 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CDCA4Q9BXL8 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CDCA4Q9BXL8 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.73■□□□□ 0.91
CDCA4Q9BXL8 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA4Q9BXL8 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA4Q9BXL8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA4Q9BXL8 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA4Q9BXL8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA4Q9BXL8 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA4Q9BXL8 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.73■□□□□ 0.91
CDCA4Q9BXL8 LINC00526-201ENST00000581067 1875 ntBASIC20.73■□□□□ 0.91
CDCA4Q9BXL8 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA4Q9BXL8 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA4Q9BXL8 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA4Q9BXL8 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CDCA4Q9BXL8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA4Q9BXL8 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA4Q9BXL8 MIR639-201ENST00000384974 98 ntBASIC20.72■□□□□ 0.91
CDCA4Q9BXL8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.72■□□□□ 0.91
CDCA4Q9BXL8 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
CDCA4Q9BXL8 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.72■□□□□ 0.91
CDCA4Q9BXL8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.72■□□□□ 0.91
CDCA4Q9BXL8 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA4Q9BXL8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.72■□□□□ 0.91
CDCA4Q9BXL8 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA4Q9BXL8 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.72■□□□□ 0.91
CDCA4Q9BXL8 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA4Q9BXL8 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA4Q9BXL8 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA4Q9BXL8 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA4Q9BXL8 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA4Q9BXL8 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.71■□□□□ 0.91
CDCA4Q9BXL8 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA4Q9BXL8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA4Q9BXL8 AC092068.2-201ENST00000590491 1708 ntBASIC20.71■□□□□ 0.91
CDCA4Q9BXL8 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.71■□□□□ 0.91
CDCA4Q9BXL8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA4Q9BXL8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA4Q9BXL8 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CDCA4Q9BXL8 C1orf229-201ENST00000623686 2258 ntBASIC20.7■□□□□ 0.9
CDCA4Q9BXL8 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA4Q9BXL8 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.7■□□□□ 0.9
CDCA4Q9BXL8 AC127496.7-201ENST00000625110 1798 ntBASIC20.7■□□□□ 0.9
CDCA4Q9BXL8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.7■□□□□ 0.9
CDCA4Q9BXL8 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA4Q9BXL8 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CDCA4Q9BXL8 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA4Q9BXL8 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.7■□□□□ 0.9
CDCA4Q9BXL8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.7■□□□□ 0.9
CDCA4Q9BXL8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.7■□□□□ 0.9
CDCA4Q9BXL8 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA4Q9BXL8 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA4Q9BXL8 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.7■□□□□ 0.9
CDCA4Q9BXL8 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA4Q9BXL8 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA4Q9BXL8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA4Q9BXL8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA4Q9BXL8 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
CDCA4Q9BXL8 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CDCA4Q9BXL8 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA4Q9BXL8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA4Q9BXL8 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA4Q9BXL8 AC137767.1-201ENST00000602918 1920 ntBASIC20.68■□□□□ 0.9
CDCA4Q9BXL8 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
CDCA4Q9BXL8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CDCA4Q9BXL8 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA4Q9BXL8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA4Q9BXL8 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA4Q9BXL8 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA4Q9BXL8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA4Q9BXL8 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.67■□□□□ 0.9
CDCA4Q9BXL8 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA4Q9BXL8 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA4Q9BXL8 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CDCA4Q9BXL8 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA4Q9BXL8 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.67■□□□□ 0.9
CDCA4Q9BXL8 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.67■□□□□ 0.9
CDCA4Q9BXL8 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA4Q9BXL8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA4Q9BXL8 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA4Q9BXL8 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CDCA4Q9BXL8 GUSBP5-202ENST00000510805 1989 ntBASIC20.66■□□□□ 0.9
CDCA4Q9BXL8 AC016575.1-201ENST00000607026 382 ntBASIC20.66■□□□□ 0.9
CDCA4Q9BXL8 CR559946.2-201ENST00000623684 991 ntBASIC20.66■□□□□ 0.9
CDCA4Q9BXL8 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA4Q9BXL8 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA4Q9BXL8 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA4Q9BXL8 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CDCA4Q9BXL8 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA4Q9BXL8 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.66■□□□□ 0.9
CDCA4Q9BXL8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
CDCA4Q9BXL8 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 357.3 ms