Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCGF1Q9BSM1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCGF1Q9BSM1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PCGF1Q9BSM1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.24■□□□□ 0.67
PCGF1Q9BSM1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.24■□□□□ 0.67
PCGF1Q9BSM1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.24■□□□□ 0.67
PCGF1Q9BSM1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.24■□□□□ 0.67
PCGF1Q9BSM1 AC131212.1-201ENST00000613771 668 ntBASIC19.24■□□□□ 0.67
PCGF1Q9BSM1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PCGF1Q9BSM1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCGF1Q9BSM1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCGF1Q9BSM1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.24■□□□□ 0.67
PCGF1Q9BSM1 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCGF1Q9BSM1 AC022211.4-201ENST00000625094 2161 ntBASIC19.23■□□□□ 0.67
PCGF1Q9BSM1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCGF1Q9BSM1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCGF1Q9BSM1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCGF1Q9BSM1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.23■□□□□ 0.67
PCGF1Q9BSM1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCGF1Q9BSM1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCGF1Q9BSM1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
PCGF1Q9BSM1 TSPY9P-201ENST00000440215 945 ntBASIC19.23■□□□□ 0.67
PCGF1Q9BSM1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.23■□□□□ 0.67
PCGF1Q9BSM1 TSPY11P-201ENST00000442607 1045 ntBASIC19.23■□□□□ 0.67
PCGF1Q9BSM1 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCGF1Q9BSM1 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCGF1Q9BSM1 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCGF1Q9BSM1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCGF1Q9BSM1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PCGF1Q9BSM1 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PCGF1Q9BSM1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCGF1Q9BSM1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCGF1Q9BSM1 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PCGF1Q9BSM1 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCGF1Q9BSM1 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCGF1Q9BSM1 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.22■□□□□ 0.67
PCGF1Q9BSM1 AL356441.2-201ENST00000443009 864 ntBASIC19.22■□□□□ 0.67
PCGF1Q9BSM1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.22■□□□□ 0.67
PCGF1Q9BSM1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCGF1Q9BSM1 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.22■□□□□ 0.67
PCGF1Q9BSM1 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCGF1Q9BSM1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCGF1Q9BSM1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.21■□□□□ 0.67
PCGF1Q9BSM1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCGF1Q9BSM1 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.21■□□□□ 0.67
PCGF1Q9BSM1 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PCGF1Q9BSM1 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCGF1Q9BSM1 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCGF1Q9BSM1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCGF1Q9BSM1 AC021242.3-201ENST00000607598 1377 ntBASIC19.2■□□□□ 0.66
PCGF1Q9BSM1 AC090877.2-201ENST00000558441 1738 ntBASIC19.2■□□□□ 0.66
PCGF1Q9BSM1 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCGF1Q9BSM1 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCGF1Q9BSM1 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCGF1Q9BSM1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCGF1Q9BSM1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCGF1Q9BSM1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.2■□□□□ 0.66
PCGF1Q9BSM1 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PCGF1Q9BSM1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.2■□□□□ 0.66
PCGF1Q9BSM1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.2■□□□□ 0.66
PCGF1Q9BSM1 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCGF1Q9BSM1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCGF1Q9BSM1 AC133561.1-201ENST00000568600 2415 ntBASIC19.2■□□□□ 0.66
PCGF1Q9BSM1 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.19■□□□□ 0.66
PCGF1Q9BSM1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCGF1Q9BSM1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCGF1Q9BSM1 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCGF1Q9BSM1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.19■□□□□ 0.66
PCGF1Q9BSM1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCGF1Q9BSM1 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PCGF1Q9BSM1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCGF1Q9BSM1 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.18■□□□□ 0.66
PCGF1Q9BSM1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCGF1Q9BSM1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.18■□□□□ 0.66
PCGF1Q9BSM1 SLC6A10P-202ENST00000431994 2058 ntBASIC19.18■□□□□ 0.66
PCGF1Q9BSM1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCGF1Q9BSM1 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PCGF1Q9BSM1 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCGF1Q9BSM1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCGF1Q9BSM1 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
PCGF1Q9BSM1 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.17■□□□□ 0.66
PCGF1Q9BSM1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
PCGF1Q9BSM1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.17■□□□□ 0.66
PCGF1Q9BSM1 KRT16P3-201ENST00000439127 1283 ntBASIC19.17■□□□□ 0.66
PCGF1Q9BSM1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PCGF1Q9BSM1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCGF1Q9BSM1 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCGF1Q9BSM1 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCGF1Q9BSM1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCGF1Q9BSM1 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCGF1Q9BSM1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PCGF1Q9BSM1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.17■□□□□ 0.66
PCGF1Q9BSM1 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCGF1Q9BSM1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.16■□□□□ 0.66
PCGF1Q9BSM1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCGF1Q9BSM1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCGF1Q9BSM1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.16■□□□□ 0.66
PCGF1Q9BSM1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.16■□□□□ 0.66
PCGF1Q9BSM1 UNC93B8-201ENST00000511903 705 ntBASIC19.16■□□□□ 0.66
PCGF1Q9BSM1 AP003733.4-201ENST00000623785 1697 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms