Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC31.04■■■□□ 2.56
CFAP53Q96M91 KRT16P3-201ENST00000439127 1283 ntBASIC31.03■■■□□ 2.56
CFAP53Q96M91 MTDHP2-201ENST00000601468 714 ntBASIC31.03■■■□□ 2.56
CFAP53Q96M91 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC31.03■■■□□ 2.56
CFAP53Q96M91 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
CFAP53Q96M91 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CFAP53Q96M91 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC31.02■■■□□ 2.56
CFAP53Q96M91 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC31.02■■■□□ 2.56
CFAP53Q96M91 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC31.02■■■□□ 2.56
CFAP53Q96M91 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC31.02■■■□□ 2.56
CFAP53Q96M91 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC31.02■■■□□ 2.56
CFAP53Q96M91 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC31.02■■■□□ 2.56
CFAP53Q96M91 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC31.02■■■□□ 2.56
CFAP53Q96M91 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
CFAP53Q96M91 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.55
CFAP53Q96M91 STK32C-205ENST00000456004 607 ntTSL 2 BASIC31.01■■■□□ 2.55
CFAP53Q96M91 GRAMD4P7-201ENST00000578182 1232 ntBASIC31.01■■■□□ 2.55
CFAP53Q96M91 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.55
CFAP53Q96M91 AC131274.2-201ENST00000580697 1507 ntBASIC31.01■■■□□ 2.55
CFAP53Q96M91 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC31.01■■■□□ 2.55
CFAP53Q96M91 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CFAP53Q96M91 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
CFAP53Q96M91 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC31.01■■■□□ 2.55
CFAP53Q96M91 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC31.01■■■□□ 2.55
CFAP53Q96M91 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CFAP53Q96M91 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC31.01■■■□□ 2.55
CFAP53Q96M91 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CFAP53Q96M91 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC31■■■□□ 2.55
CFAP53Q96M91 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CFAP53Q96M91 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC31■■■□□ 2.55
CFAP53Q96M91 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC31■■■□□ 2.55
CFAP53Q96M91 AC004448.1-201ENST00000458332 883 ntBASIC31■■■□□ 2.55
CFAP53Q96M91 AC010997.5-201ENST00000609182 354 ntBASIC31■■■□□ 2.55
CFAP53Q96M91 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CFAP53Q96M91 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
CFAP53Q96M91 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CFAP53Q96M91 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC30.99■■■□□ 2.55
CFAP53Q96M91 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
CFAP53Q96M91 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
CFAP53Q96M91 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CFAP53Q96M91 AL022069.1-201ENST00000568025 1636 ntBASIC30.98■■■□□ 2.55
CFAP53Q96M91 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CFAP53Q96M91 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
CFAP53Q96M91 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
CFAP53Q96M91 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC30.98■■■□□ 2.55
CFAP53Q96M91 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC30.98■■■□□ 2.55
CFAP53Q96M91 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CFAP53Q96M91 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CFAP53Q96M91 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC30.97■■■□□ 2.55
CFAP53Q96M91 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
CFAP53Q96M91 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CFAP53Q96M91 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC30.96■■■□□ 2.55
CFAP53Q96M91 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC30.96■■■□□ 2.55
CFAP53Q96M91 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC30.96■■■□□ 2.55
CFAP53Q96M91 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC30.96■■■□□ 2.55
CFAP53Q96M91 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CFAP53Q96M91 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CFAP53Q96M91 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.55
CFAP53Q96M91 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC30.95■■■□□ 2.55
CFAP53Q96M91 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC30.95■■■□□ 2.55
CFAP53Q96M91 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CFAP53Q96M91 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
CFAP53Q96M91 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC30.94■■■□□ 2.54
CFAP53Q96M91 MIR6722-201ENST00000617286 78 ntBASIC30.94■■■□□ 2.54
CFAP53Q96M91 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC30.94■■■□□ 2.54
CFAP53Q96M91 EXOG-217ENST00000630638 197 ntTSL 5 BASIC30.94■■■□□ 2.54
CFAP53Q96M91 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
CFAP53Q96M91 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CFAP53Q96M91 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC30.93■■■□□ 2.54
CFAP53Q96M91 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
CFAP53Q96M91 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.93■■■□□ 2.54
CFAP53Q96M91 EED-207ENST00000528180 1745 ntTSL 5 BASIC30.93■■■□□ 2.54
CFAP53Q96M91 AL161729.1-201ENST00000604104 1402 ntBASIC30.92■■■□□ 2.54
CFAP53Q96M91 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CFAP53Q96M91 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
CFAP53Q96M91 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC30.91■■■□□ 2.54
CFAP53Q96M91 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC30.91■■■□□ 2.54
CFAP53Q96M91 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC30.91■■■□□ 2.54
CFAP53Q96M91 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
CFAP53Q96M91 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CFAP53Q96M91 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
CFAP53Q96M91 LSM4-201ENST00000252816 986 ntTSL 2 BASIC30.9■■■□□ 2.54
CFAP53Q96M91 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC30.9■■■□□ 2.54
CFAP53Q96M91 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CFAP53Q96M91 CD37-213ENST00000598095 1598 ntTSL 2 BASIC30.9■■■□□ 2.54
CFAP53Q96M91 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC30.9■■■□□ 2.54
CFAP53Q96M91 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CFAP53Q96M91 MIR6724-1-201ENST00000616420 92 ntBASIC30.89■■■□□ 2.54
CFAP53Q96M91 MIR6724-2-201ENST00000616483 92 ntBASIC30.89■■■□□ 2.54
CFAP53Q96M91 MIR6724-4-201ENST00000617390 92 ntBASIC30.89■■■□□ 2.54
CFAP53Q96M91 MIR6724-3-201ENST00000622482 92 ntBASIC30.89■■■□□ 2.54
CFAP53Q96M91 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CFAP53Q96M91 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
CFAP53Q96M91 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC30.88■■■□□ 2.53
CFAP53Q96M91 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
CFAP53Q96M91 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CFAP53Q96M91 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC30.88■■■□□ 2.53
CFAP53Q96M91 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CFAP53Q96M91 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
CFAP53Q96M91 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms