Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ARHGEF39Q8N4T4 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ARHGEF39Q8N4T4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ARHGEF39Q8N4T4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.94■■□□□ 1.1
ARHGEF39Q8N4T4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARHGEF39Q8N4T4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARHGEF39Q8N4T4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
ARHGEF39Q8N4T4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.94■■□□□ 1.1
ARHGEF39Q8N4T4 AC004448.1-201ENST00000458332 883 ntBASIC21.94■■□□□ 1.1
ARHGEF39Q8N4T4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
ARHGEF39Q8N4T4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
ARHGEF39Q8N4T4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARHGEF39Q8N4T4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARHGEF39Q8N4T4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ARHGEF39Q8N4T4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.94■■□□□ 1.1
ARHGEF39Q8N4T4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.94■■□□□ 1.1
ARHGEF39Q8N4T4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARHGEF39Q8N4T4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARHGEF39Q8N4T4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ARHGEF39Q8N4T4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ARHGEF39Q8N4T4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.93■■□□□ 1.1
ARHGEF39Q8N4T4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ARHGEF39Q8N4T4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.93■■□□□ 1.1
ARHGEF39Q8N4T4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
ARHGEF39Q8N4T4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ARHGEF39Q8N4T4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
ARHGEF39Q8N4T4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ARHGEF39Q8N4T4 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
ARHGEF39Q8N4T4 TSPY9P-201ENST00000440215 945 ntBASIC21.92■■□□□ 1.1
ARHGEF39Q8N4T4 TSPY11P-201ENST00000442607 1045 ntBASIC21.92■■□□□ 1.1
ARHGEF39Q8N4T4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ARHGEF39Q8N4T4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ARHGEF39Q8N4T4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ARHGEF39Q8N4T4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ARHGEF39Q8N4T4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.92■■□□□ 1.1
ARHGEF39Q8N4T4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.91■■□□□ 1.1
ARHGEF39Q8N4T4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ARHGEF39Q8N4T4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.91■■□□□ 1.1
ARHGEF39Q8N4T4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.91■■□□□ 1.1
ARHGEF39Q8N4T4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
ARHGEF39Q8N4T4 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.91■■□□□ 1.1
ARHGEF39Q8N4T4 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.91■■□□□ 1.1
ARHGEF39Q8N4T4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
ARHGEF39Q8N4T4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ARHGEF39Q8N4T4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.9■■□□□ 1.1
ARHGEF39Q8N4T4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.9■■□□□ 1.1
ARHGEF39Q8N4T4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
ARHGEF39Q8N4T4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.9■■□□□ 1.1
ARHGEF39Q8N4T4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.89■■□□□ 1.1
ARHGEF39Q8N4T4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
ARHGEF39Q8N4T4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.1
ARHGEF39Q8N4T4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.89■■□□□ 1.09
ARHGEF39Q8N4T4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
ARHGEF39Q8N4T4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
ARHGEF39Q8N4T4 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.89■■□□□ 1.09
ARHGEF39Q8N4T4 MIR6722-201ENST00000617286 78 ntBASIC21.89■■□□□ 1.09
ARHGEF39Q8N4T4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.89■■□□□ 1.09
ARHGEF39Q8N4T4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.89■■□□□ 1.09
ARHGEF39Q8N4T4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
ARHGEF39Q8N4T4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
ARHGEF39Q8N4T4 AC010997.5-201ENST00000609182 354 ntBASIC21.88■■□□□ 1.09
ARHGEF39Q8N4T4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.88■■□□□ 1.09
ARHGEF39Q8N4T4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ARHGEF39Q8N4T4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ARHGEF39Q8N4T4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ARHGEF39Q8N4T4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ARHGEF39Q8N4T4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
ARHGEF39Q8N4T4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.88■■□□□ 1.09
ARHGEF39Q8N4T4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.88■■□□□ 1.09
ARHGEF39Q8N4T4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ARHGEF39Q8N4T4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
ARHGEF39Q8N4T4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.87■■□□□ 1.09
ARHGEF39Q8N4T4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ARHGEF39Q8N4T4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
ARHGEF39Q8N4T4 KRT16P3-201ENST00000439127 1283 ntBASIC21.87■■□□□ 1.09
ARHGEF39Q8N4T4 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.87■■□□□ 1.09
ARHGEF39Q8N4T4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ARHGEF39Q8N4T4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.87■■□□□ 1.09
ARHGEF39Q8N4T4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.87■■□□□ 1.09
ARHGEF39Q8N4T4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
ARHGEF39Q8N4T4 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ARHGEF39Q8N4T4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ARHGEF39Q8N4T4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.86■■□□□ 1.09
ARHGEF39Q8N4T4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.86■■□□□ 1.09
ARHGEF39Q8N4T4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.86■■□□□ 1.09
ARHGEF39Q8N4T4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.86■■□□□ 1.09
ARHGEF39Q8N4T4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
ARHGEF39Q8N4T4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
ARHGEF39Q8N4T4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ARHGEF39Q8N4T4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
ARHGEF39Q8N4T4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
ARHGEF39Q8N4T4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.86■■□□□ 1.09
ARHGEF39Q8N4T4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ARHGEF39Q8N4T4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ARHGEF39Q8N4T4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
ARHGEF39Q8N4T4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ARHGEF39Q8N4T4 AL022069.1-201ENST00000568025 1636 ntBASIC21.85■■□□□ 1.09
ARHGEF39Q8N4T4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.85■■□□□ 1.09
ARHGEF39Q8N4T4 MTDHP2-201ENST00000601468 714 ntBASIC21.85■■□□□ 1.09
ARHGEF39Q8N4T4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms