Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
VPS52Q8N1B4 MIR6722-201ENST00000617286 78 ntBASIC24.98■■□□□ 1.59
VPS52Q8N1B4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.98■■□□□ 1.59
VPS52Q8N1B4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
VPS52Q8N1B4 ERN1-208ENST00000606895 2068 ntBASIC24.98■■□□□ 1.59
VPS52Q8N1B4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
VPS52Q8N1B4 AC096887.2-201ENST00000623443 1957 ntBASIC24.98■■□□□ 1.59
VPS52Q8N1B4 AC097639.1-201ENST00000565519 1891 ntBASIC24.98■■□□□ 1.59
VPS52Q8N1B4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
VPS52Q8N1B4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
VPS52Q8N1B4 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
VPS52Q8N1B4 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
VPS52Q8N1B4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC24.97■■□□□ 1.59
VPS52Q8N1B4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.97■■□□□ 1.59
VPS52Q8N1B4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
VPS52Q8N1B4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC24.96■■□□□ 1.59
VPS52Q8N1B4 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
VPS52Q8N1B4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.96■■□□□ 1.59
VPS52Q8N1B4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
VPS52Q8N1B4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
VPS52Q8N1B4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
VPS52Q8N1B4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC24.96■■□□□ 1.59
VPS52Q8N1B4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
VPS52Q8N1B4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.96■■□□□ 1.59
VPS52Q8N1B4 AC133561.4-201ENST00000566112 224 ntBASIC24.96■■□□□ 1.59
VPS52Q8N1B4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
VPS52Q8N1B4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
VPS52Q8N1B4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.59
VPS52Q8N1B4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24.95■■□□□ 1.59
VPS52Q8N1B4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
VPS52Q8N1B4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
VPS52Q8N1B4 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
VPS52Q8N1B4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
VPS52Q8N1B4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
VPS52Q8N1B4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
VPS52Q8N1B4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.94■■□□□ 1.58
VPS52Q8N1B4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
VPS52Q8N1B4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.94■■□□□ 1.58
VPS52Q8N1B4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
VPS52Q8N1B4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
VPS52Q8N1B4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.94■■□□□ 1.58
VPS52Q8N1B4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.93■■□□□ 1.58
VPS52Q8N1B4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC24.93■■□□□ 1.58
VPS52Q8N1B4 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
VPS52Q8N1B4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
VPS52Q8N1B4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.93■■□□□ 1.58
VPS52Q8N1B4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.93■■□□□ 1.58
VPS52Q8N1B4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
VPS52Q8N1B4 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
VPS52Q8N1B4 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.92■■□□□ 1.58
VPS52Q8N1B4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
VPS52Q8N1B4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC24.92■■□□□ 1.58
VPS52Q8N1B4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC24.92■■□□□ 1.58
VPS52Q8N1B4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
VPS52Q8N1B4 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC24.92■■□□□ 1.58
VPS52Q8N1B4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
VPS52Q8N1B4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
VPS52Q8N1B4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
VPS52Q8N1B4 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
VPS52Q8N1B4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC24.91■■□□□ 1.58
VPS52Q8N1B4 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
VPS52Q8N1B4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
VPS52Q8N1B4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.91■■□□□ 1.58
VPS52Q8N1B4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
VPS52Q8N1B4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
VPS52Q8N1B4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.9■■□□□ 1.58
VPS52Q8N1B4 PBX2P1-201ENST00000493219 1291 ntBASIC24.9■■□□□ 1.58
VPS52Q8N1B4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.9■■□□□ 1.58
VPS52Q8N1B4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
VPS52Q8N1B4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
VPS52Q8N1B4 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
VPS52Q8N1B4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC24.89■■□□□ 1.58
VPS52Q8N1B4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC24.89■■□□□ 1.58
VPS52Q8N1B4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.57
VPS52Q8N1B4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.89■■□□□ 1.57
VPS52Q8N1B4 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.57
VPS52Q8N1B4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
VPS52Q8N1B4 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
VPS52Q8N1B4 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.57
VPS52Q8N1B4 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
VPS52Q8N1B4 AC020928.2-201ENST00000588717 2197 ntBASIC24.88■■□□□ 1.57
VPS52Q8N1B4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
VPS52Q8N1B4 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
VPS52Q8N1B4 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.88■■□□□ 1.57
VPS52Q8N1B4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.88■■□□□ 1.57
VPS52Q8N1B4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC24.88■■□□□ 1.57
VPS52Q8N1B4 AC106739.1-201ENST00000617035 715 ntBASIC24.88■■□□□ 1.57
VPS52Q8N1B4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.88■■□□□ 1.57
VPS52Q8N1B4 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
VPS52Q8N1B4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
VPS52Q8N1B4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
VPS52Q8N1B4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC24.87■■□□□ 1.57
VPS52Q8N1B4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
VPS52Q8N1B4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.87■■□□□ 1.57
VPS52Q8N1B4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
VPS52Q8N1B4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
VPS52Q8N1B4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
VPS52Q8N1B4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
VPS52Q8N1B4 AC010501.1-201ENST00000606270 1962 ntBASIC24.86■■□□□ 1.57
VPS52Q8N1B4 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms