Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINC00346Q8IVM7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LINC00346Q8IVM7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LINC00346Q8IVM7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
LINC00346Q8IVM7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
LINC00346Q8IVM7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINC00346Q8IVM7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINC00346Q8IVM7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINC00346Q8IVM7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LINC00346Q8IVM7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LINC00346Q8IVM7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
LINC00346Q8IVM7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.38■□□□□ 0.85
LINC00346Q8IVM7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINC00346Q8IVM7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LINC00346Q8IVM7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
LINC00346Q8IVM7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LINC00346Q8IVM7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LINC00346Q8IVM7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
LINC00346Q8IVM7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
LINC00346Q8IVM7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LINC00346Q8IVM7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
LINC00346Q8IVM7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LINC00346Q8IVM7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.37■□□□□ 0.85
LINC00346Q8IVM7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.37■□□□□ 0.85
LINC00346Q8IVM7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
LINC00346Q8IVM7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LINC00346Q8IVM7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.37■□□□□ 0.85
LINC00346Q8IVM7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINC00346Q8IVM7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINC00346Q8IVM7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LINC00346Q8IVM7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.36■□□□□ 0.85
LINC00346Q8IVM7 AC004987.1-201ENST00000428627 508 ntBASIC20.36■□□□□ 0.85
LINC00346Q8IVM7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.36■□□□□ 0.85
LINC00346Q8IVM7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINC00346Q8IVM7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
LINC00346Q8IVM7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
LINC00346Q8IVM7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINC00346Q8IVM7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
LINC00346Q8IVM7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LINC00346Q8IVM7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LINC00346Q8IVM7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LINC00346Q8IVM7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LINC00346Q8IVM7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LINC00346Q8IVM7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LINC00346Q8IVM7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
LINC00346Q8IVM7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LINC00346Q8IVM7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LINC00346Q8IVM7 ATP5G2P3-201ENST00000429083 425 ntBASIC20.35■□□□□ 0.85
LINC00346Q8IVM7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LINC00346Q8IVM7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.35■□□□□ 0.85
LINC00346Q8IVM7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LINC00346Q8IVM7 BHLHE23-202ENST00000612929 1109 ntBASIC20.35■□□□□ 0.85
LINC00346Q8IVM7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LINC00346Q8IVM7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINC00346Q8IVM7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINC00346Q8IVM7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LINC00346Q8IVM7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINC00346Q8IVM7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
LINC00346Q8IVM7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINC00346Q8IVM7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LINC00346Q8IVM7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
LINC00346Q8IVM7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
LINC00346Q8IVM7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.33■□□□□ 0.85
LINC00346Q8IVM7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
LINC00346Q8IVM7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
LINC00346Q8IVM7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LINC00346Q8IVM7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LINC00346Q8IVM7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
LINC00346Q8IVM7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.33■□□□□ 0.84
LINC00346Q8IVM7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LINC00346Q8IVM7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LINC00346Q8IVM7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
LINC00346Q8IVM7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LINC00346Q8IVM7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LINC00346Q8IVM7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
LINC00346Q8IVM7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.32■□□□□ 0.84
LINC00346Q8IVM7 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LINC00346Q8IVM7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LINC00346Q8IVM7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LINC00346Q8IVM7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINC00346Q8IVM7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINC00346Q8IVM7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LINC00346Q8IVM7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LINC00346Q8IVM7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LINC00346Q8IVM7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINC00346Q8IVM7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINC00346Q8IVM7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LINC00346Q8IVM7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.31■□□□□ 0.84
LINC00346Q8IVM7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINC00346Q8IVM7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.31■□□□□ 0.84
LINC00346Q8IVM7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINC00346Q8IVM7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINC00346Q8IVM7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.3■□□□□ 0.84
LINC00346Q8IVM7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINC00346Q8IVM7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINC00346Q8IVM7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINC00346Q8IVM7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
LINC00346Q8IVM7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LINC00346Q8IVM7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
LINC00346Q8IVM7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms