Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LCA10Q71F78 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LCA10Q71F78 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
LCA10Q71F78 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
LCA10Q71F78 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC12.35□□□□□ -0.43
LCA10Q71F78 LINC00273-201ENST00000539813 1452 ntBASIC12.35□□□□□ -0.43
LCA10Q71F78 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LCA10Q71F78 AC138932.1-201ENST00000534164 6830 ntBASIC12.35□□□□□ -0.43
LCA10Q71F78 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LCA10Q71F78 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LCA10Q71F78 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LCA10Q71F78 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LCA10Q71F78 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LCA10Q71F78 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LCA10Q71F78 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LCA10Q71F78 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LCA10Q71F78 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
LCA10Q71F78 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC12.35□□□□□ -0.43
LCA10Q71F78 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LCA10Q71F78 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LCA10Q71F78 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LCA10Q71F78 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LCA10Q71F78 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
LCA10Q71F78 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LCA10Q71F78 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LCA10Q71F78 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LCA10Q71F78 MIR6090-201ENST00000622481 60 ntBASIC12.34□□□□□ -0.43
LCA10Q71F78 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
LCA10Q71F78 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LCA10Q71F78 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LCA10Q71F78 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LCA10Q71F78 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LCA10Q71F78 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LCA10Q71F78 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LCA10Q71F78 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC12.34□□□□□ -0.43
LCA10Q71F78 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
LCA10Q71F78 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC12.33□□□□□ -0.44
LCA10Q71F78 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
LCA10Q71F78 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LCA10Q71F78 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
LCA10Q71F78 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC12.33□□□□□ -0.44
LCA10Q71F78 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LCA10Q71F78 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LCA10Q71F78 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC12.33□□□□□ -0.44
LCA10Q71F78 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LCA10Q71F78 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LCA10Q71F78 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
LCA10Q71F78 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LCA10Q71F78 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LCA10Q71F78 AC097639.1-201ENST00000565519 1891 ntBASIC12.33□□□□□ -0.44
LCA10Q71F78 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
LCA10Q71F78 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LCA10Q71F78 DUSP8P3-201ENST00000399571 1760 ntBASIC12.33□□□□□ -0.44
LCA10Q71F78 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LCA10Q71F78 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LCA10Q71F78 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
LCA10Q71F78 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LCA10Q71F78 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC12.32□□□□□ -0.44
LCA10Q71F78 WWC2-AS2-201ENST00000578387 2183 ntBASIC12.32□□□□□ -0.44
LCA10Q71F78 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
LCA10Q71F78 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LCA10Q71F78 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LCA10Q71F78 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LCA10Q71F78 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC12.32□□□□□ -0.44
LCA10Q71F78 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC12.32□□□□□ -0.44
LCA10Q71F78 LINC01124-201ENST00000409786 2117 ntBASIC12.32□□□□□ -0.44
LCA10Q71F78 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LCA10Q71F78 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC12.32□□□□□ -0.44
LCA10Q71F78 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC12.32□□□□□ -0.44
LCA10Q71F78 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LCA10Q71F78 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LCA10Q71F78 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LCA10Q71F78 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC12.31□□□□□ -0.44
LCA10Q71F78 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LCA10Q71F78 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LCA10Q71F78 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
LCA10Q71F78 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC12.31□□□□□ -0.44
LCA10Q71F78 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
LCA10Q71F78 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LCA10Q71F78 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LCA10Q71F78 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LCA10Q71F78 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LCA10Q71F78 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
LCA10Q71F78 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LCA10Q71F78 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
LCA10Q71F78 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LCA10Q71F78 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
LCA10Q71F78 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
LCA10Q71F78 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LCA10Q71F78 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LCA10Q71F78 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC12.3□□□□□ -0.44
LCA10Q71F78 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LCA10Q71F78 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LCA10Q71F78 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LCA10Q71F78 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC12.3□□□□□ -0.44
LCA10Q71F78 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LCA10Q71F78 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LCA10Q71F78 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LCA10Q71F78 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LCA10Q71F78 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms