Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C11orf88Q6PI97 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.9■□□□□ 0.78
C11orf88Q6PI97 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.9■□□□□ 0.78
C11orf88Q6PI97 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
C11orf88Q6PI97 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
C11orf88Q6PI97 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
C11orf88Q6PI97 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
C11orf88Q6PI97 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C11orf88Q6PI97 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.78
C11orf88Q6PI97 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C11orf88Q6PI97 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C11orf88Q6PI97 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C11orf88Q6PI97 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C11orf88Q6PI97 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C11orf88Q6PI97 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C11orf88Q6PI97 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
C11orf88Q6PI97 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C11orf88Q6PI97 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
C11orf88Q6PI97 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.89■□□□□ 0.77
C11orf88Q6PI97 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
C11orf88Q6PI97 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.88■□□□□ 0.77
C11orf88Q6PI97 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
C11orf88Q6PI97 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
C11orf88Q6PI97 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
C11orf88Q6PI97 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.88■□□□□ 0.77
C11orf88Q6PI97 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.88■□□□□ 0.77
C11orf88Q6PI97 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
C11orf88Q6PI97 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
C11orf88Q6PI97 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
C11orf88Q6PI97 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
C11orf88Q6PI97 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
C11orf88Q6PI97 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
C11orf88Q6PI97 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
C11orf88Q6PI97 AC012354.3-201ENST00000623734 483 ntBASIC19.88■□□□□ 0.77
C11orf88Q6PI97 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
C11orf88Q6PI97 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
C11orf88Q6PI97 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
C11orf88Q6PI97 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
C11orf88Q6PI97 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
C11orf88Q6PI97 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
C11orf88Q6PI97 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.87■□□□□ 0.77
C11orf88Q6PI97 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
C11orf88Q6PI97 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.87■□□□□ 0.77
C11orf88Q6PI97 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
C11orf88Q6PI97 ECEL1P2-201ENST00000461596 1295 ntBASIC19.87■□□□□ 0.77
C11orf88Q6PI97 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
C11orf88Q6PI97 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.87■□□□□ 0.77
C11orf88Q6PI97 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
C11orf88Q6PI97 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.87■□□□□ 0.77
C11orf88Q6PI97 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
C11orf88Q6PI97 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
C11orf88Q6PI97 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
C11orf88Q6PI97 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.86■□□□□ 0.77
C11orf88Q6PI97 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
C11orf88Q6PI97 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.86■□□□□ 0.77
C11orf88Q6PI97 AC092296.2-201ENST00000589470 999 ntBASIC19.86■□□□□ 0.77
C11orf88Q6PI97 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
C11orf88Q6PI97 AC141586.4-201ENST00000624558 1573 ntBASIC19.86■□□□□ 0.77
C11orf88Q6PI97 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
C11orf88Q6PI97 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
C11orf88Q6PI97 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
C11orf88Q6PI97 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.85■□□□□ 0.77
C11orf88Q6PI97 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
C11orf88Q6PI97 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.85■□□□□ 0.77
C11orf88Q6PI97 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
C11orf88Q6PI97 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
C11orf88Q6PI97 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
C11orf88Q6PI97 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
C11orf88Q6PI97 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
C11orf88Q6PI97 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.84■□□□□ 0.77
C11orf88Q6PI97 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
C11orf88Q6PI97 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
C11orf88Q6PI97 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
C11orf88Q6PI97 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
C11orf88Q6PI97 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
C11orf88Q6PI97 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
C11orf88Q6PI97 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
C11orf88Q6PI97 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
C11orf88Q6PI97 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
C11orf88Q6PI97 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.84■□□□□ 0.77
C11orf88Q6PI97 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
C11orf88Q6PI97 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
C11orf88Q6PI97 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
C11orf88Q6PI97 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
C11orf88Q6PI97 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
C11orf88Q6PI97 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
C11orf88Q6PI97 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
C11orf88Q6PI97 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
C11orf88Q6PI97 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
C11orf88Q6PI97 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
C11orf88Q6PI97 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
C11orf88Q6PI97 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
C11orf88Q6PI97 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
C11orf88Q6PI97 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
C11orf88Q6PI97 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
C11orf88Q6PI97 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
C11orf88Q6PI97 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
C11orf88Q6PI97 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
C11orf88Q6PI97 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
C11orf88Q6PI97 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms