Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB5BP61020 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB5BP61020 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB5BP61020 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAB5BP61020 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB5BP61020 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RAB5BP61020 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB5BP61020 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RAB5BP61020 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RAB5BP61020 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.17■□□□□ 0.5
RAB5BP61020 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB5BP61020 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RAB5BP61020 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.17■□□□□ 0.5
RAB5BP61020 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC18.17■□□□□ 0.5
RAB5BP61020 AC142472.1-201ENST00000612013 1741 ntBASIC18.17■□□□□ 0.5
RAB5BP61020 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB5BP61020 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
RAB5BP61020 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAB5BP61020 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC18.16■□□□□ 0.5
RAB5BP61020 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB5BP61020 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB5BP61020 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB5BP61020 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB5BP61020 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB5BP61020 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB5BP61020 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RAB5BP61020 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RAB5BP61020 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB5BP61020 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB5BP61020 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RAB5BP61020 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RAB5BP61020 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB5BP61020 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAB5BP61020 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAB5BP61020 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RAB5BP61020 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB5BP61020 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB5BP61020 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
RAB5BP61020 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB5BP61020 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB5BP61020 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB5BP61020 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB5BP61020 GUSBP5-202ENST00000510805 1989 ntBASIC18.15■□□□□ 0.5
RAB5BP61020 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB5BP61020 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.14■□□□□ 0.5
RAB5BP61020 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RAB5BP61020 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB5BP61020 ECEL1P1-201ENST00000373592 1742 ntBASIC18.14■□□□□ 0.49
RAB5BP61020 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB5BP61020 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RAB5BP61020 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RAB5BP61020 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
RAB5BP61020 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RAB5BP61020 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.13■□□□□ 0.49
RAB5BP61020 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB5BP61020 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RAB5BP61020 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB5BP61020 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB5BP61020 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.13■□□□□ 0.49
RAB5BP61020 EBPL-203ENST00000378270 579 ntTSL 2 BASIC18.13■□□□□ 0.49
RAB5BP61020 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.13■□□□□ 0.49
RAB5BP61020 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.13■□□□□ 0.49
RAB5BP61020 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB5BP61020 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RAB5BP61020 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.12■□□□□ 0.49
RAB5BP61020 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB5BP61020 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB5BP61020 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.12■□□□□ 0.49
RAB5BP61020 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB5BP61020 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RAB5BP61020 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB5BP61020 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RAB5BP61020 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RAB5BP61020 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB5BP61020 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB5BP61020 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAB5BP61020 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC18.11■□□□□ 0.49
RAB5BP61020 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB5BP61020 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB5BP61020 AL391422.3-201ENST00000603791 2761 ntBASIC18.11■□□□□ 0.49
RAB5BP61020 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAB5BP61020 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RAB5BP61020 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
RAB5BP61020 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC18.1■□□□□ 0.49
RAB5BP61020 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB5BP61020 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB5BP61020 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB5BP61020 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
RAB5BP61020 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB5BP61020 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RAB5BP61020 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RAB5BP61020 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB5BP61020 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB5BP61020 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RAB5BP61020 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.1■□□□□ 0.49
RAB5BP61020 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB5BP61020 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB5BP61020 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAB5BP61020 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAB5BP61020 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms