Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC25A1P53007 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC25A1P53007 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
SLC25A1P53007 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC25A1P53007 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SLC25A1P53007 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC25A1P53007 DUX4L9-201ENST00000449051 1259 ntBASIC20.55■□□□□ 0.88
SLC25A1P53007 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
SLC25A1P53007 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC25A1P53007 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.55■□□□□ 0.88
SLC25A1P53007 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC25A1P53007 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.55■□□□□ 0.88
SLC25A1P53007 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC25A1P53007 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SLC25A1P53007 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.55■□□□□ 0.88
SLC25A1P53007 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC25A1P53007 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.54■□□□□ 0.88
SLC25A1P53007 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.54■□□□□ 0.88
SLC25A1P53007 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC25A1P53007 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC25A1P53007 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC25A1P53007 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC25A1P53007 AC133561.1-201ENST00000568600 2415 ntBASIC20.54■□□□□ 0.88
SLC25A1P53007 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC25A1P53007 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC25A1P53007 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC25A1P53007 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SLC25A1P53007 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
SLC25A1P53007 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC25A1P53007 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC25A1P53007 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC25A1P53007 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC25A1P53007 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC25A1P53007 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC25A1P53007 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SLC25A1P53007 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC25A1P53007 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC25A1P53007 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC25A1P53007 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.53■□□□□ 0.88
SLC25A1P53007 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC25A1P53007 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC25A1P53007 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SLC25A1P53007 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC25A1P53007 RARRES2P2-201ENST00000394842 485 ntBASIC20.52■□□□□ 0.88
SLC25A1P53007 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SLC25A1P53007 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
SLC25A1P53007 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC25A1P53007 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SLC25A1P53007 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC25A1P53007 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.51■□□□□ 0.87
SLC25A1P53007 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC25A1P53007 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC25A1P53007 LONRF2P2-201ENST00000439212 571 ntBASIC20.51■□□□□ 0.87
SLC25A1P53007 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.51■□□□□ 0.87
SLC25A1P53007 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.51■□□□□ 0.87
SLC25A1P53007 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC25A1P53007 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.51■□□□□ 0.87
SLC25A1P53007 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC25A1P53007 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC25A1P53007 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.51■□□□□ 0.87
SLC25A1P53007 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC25A1P53007 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLC25A1P53007 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC25A1P53007 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SLC25A1P53007 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SLC25A1P53007 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC25A1P53007 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC25A1P53007 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SLC25A1P53007 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SLC25A1P53007 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC25A1P53007 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC25A1P53007 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SLC25A1P53007 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC25A1P53007 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.49■□□□□ 0.87
SLC25A1P53007 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SLC25A1P53007 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC25A1P53007 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SLC25A1P53007 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.48■□□□□ 0.87
SLC25A1P53007 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SLC25A1P53007 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.48■□□□□ 0.87
SLC25A1P53007 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC25A1P53007 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.48■□□□□ 0.87
SLC25A1P53007 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SLC25A1P53007 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC25A1P53007 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC25A1P53007 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.47■□□□□ 0.87
SLC25A1P53007 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLC25A1P53007 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC25A1P53007 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC25A1P53007 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLC25A1P53007 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLC25A1P53007 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SLC25A1P53007 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.46■□□□□ 0.87
SLC25A1P53007 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC25A1P53007 U85056.1-201ENST00000616429 682 ntBASIC20.46■□□□□ 0.87
SLC25A1P53007 AC129492.7-201ENST00000622992 756 ntBASIC20.46■□□□□ 0.87
SLC25A1P53007 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.46■□□□□ 0.87
SLC25A1P53007 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC25A1P53007 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC25A1P53007 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms