Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
CPT1AP50416 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
CPT1AP50416 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
CPT1AP50416 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
CPT1AP50416 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
CPT1AP50416 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CPT1AP50416 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.88■■□□□ 1.73
CPT1AP50416 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.88■■□□□ 1.73
CPT1AP50416 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
CPT1AP50416 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CPT1AP50416 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
CPT1AP50416 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.88■■□□□ 1.73
CPT1AP50416 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CPT1AP50416 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
CPT1AP50416 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
CPT1AP50416 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.87■■□□□ 1.73
CPT1AP50416 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CPT1AP50416 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
CPT1AP50416 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CPT1AP50416 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CPT1AP50416 STK32C-205ENST00000456004 607 ntTSL 2 BASIC25.87■■□□□ 1.73
CPT1AP50416 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CPT1AP50416 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
CPT1AP50416 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC25.87■■□□□ 1.73
CPT1AP50416 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CPT1AP50416 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CPT1AP50416 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
CPT1AP50416 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC25.86■■□□□ 1.73
CPT1AP50416 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CPT1AP50416 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CPT1AP50416 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CPT1AP50416 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
CPT1AP50416 AC092171.4-201ENST00000609130 632 ntBASIC25.85■■□□□ 1.73
CPT1AP50416 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CPT1AP50416 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CPT1AP50416 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
CPT1AP50416 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CPT1AP50416 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CPT1AP50416 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CPT1AP50416 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.84■■□□□ 1.73
CPT1AP50416 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CPT1AP50416 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC25.84■■□□□ 1.73
CPT1AP50416 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.84■■□□□ 1.73
CPT1AP50416 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
CPT1AP50416 AC131274.2-201ENST00000580697 1507 ntBASIC25.83■■□□□ 1.73
CPT1AP50416 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CPT1AP50416 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CPT1AP50416 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC25.83■■□□□ 1.73
CPT1AP50416 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.83■■□□□ 1.73
CPT1AP50416 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.83■■□□□ 1.73
CPT1AP50416 RARRES2P6-201ENST00000567333 442 ntBASIC25.83■■□□□ 1.73
CPT1AP50416 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CPT1AP50416 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CPT1AP50416 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
CPT1AP50416 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
CPT1AP50416 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CPT1AP50416 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CPT1AP50416 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC25.82■■□□□ 1.72
CPT1AP50416 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.82■■□□□ 1.72
CPT1AP50416 AL121749.1-202ENST00000609313 2153 ntBASIC25.82■■□□□ 1.72
CPT1AP50416 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
CPT1AP50416 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CPT1AP50416 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
CPT1AP50416 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
CPT1AP50416 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CPT1AP50416 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
CPT1AP50416 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC25.81■■□□□ 1.72
CPT1AP50416 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC25.81■■□□□ 1.72
CPT1AP50416 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.81■■□□□ 1.72
CPT1AP50416 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
CPT1AP50416 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
CPT1AP50416 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CPT1AP50416 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CPT1AP50416 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CPT1AP50416 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.8■■□□□ 1.72
CPT1AP50416 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CPT1AP50416 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC25.8■■□□□ 1.72
CPT1AP50416 SYT6-210ENST00000641643 1587 ntBASIC25.79■■□□□ 1.72
CPT1AP50416 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
CPT1AP50416 LGR4-203ENST00000480977 492 ntTSL 2 BASIC25.79■■□□□ 1.72
CPT1AP50416 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC25.79■■□□□ 1.72
CPT1AP50416 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC25.79■■□□□ 1.72
CPT1AP50416 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.79■■□□□ 1.72
CPT1AP50416 SLC6A10P-202ENST00000431994 2058 ntBASIC25.79■■□□□ 1.72
CPT1AP50416 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CPT1AP50416 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC25.79■■□□□ 1.72
CPT1AP50416 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CPT1AP50416 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
CPT1AP50416 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
CPT1AP50416 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CPT1AP50416 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.78■■□□□ 1.72
CPT1AP50416 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CPT1AP50416 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC25.78■■□□□ 1.72
CPT1AP50416 AL136967.2-201ENST00000623968 743 ntBASIC25.78■■□□□ 1.72
CPT1AP50416 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CPT1AP50416 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CPT1AP50416 MIR6089-201ENST00000616698 64 ntBASIC25.77■■□□□ 1.72
CPT1AP50416 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
CPT1AP50416 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CPT1AP50416 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.77■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms