Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 YFR034W-AYFR034W-A 288 nt6.92□□□□□ -1.3
SSM4P40318 LAS21YJL062W 2493 nt6.91□□□□□ -1.3
SSM4P40318 YMR102CYMR102C 2505 nt6.91□□□□□ -1.3
SSM4P40318 REV7YIL139C 738 nt6.91□□□□□ -1.3
SSM4P40318 QCR2YPR191W 1107 nt6.91□□□□□ -1.3
SSM4P40318 YOS9YDR057W 1629 nt6.91□□□□□ -1.3
SSM4P40318 SGE1YPR198W 1632 nt6.91□□□□□ -1.3
SSM4P40318 ELP2YGR200C 2367 nt6.91□□□□□ -1.3
SSM4P40318 ATF1YOR377W 1578 nt6.9□□□□□ -1.3
SSM4P40318 DBP8YHR169W 1296 nt6.9□□□□□ -1.3
SSM4P40318 NMA1YLR328W 1206 nt6.9□□□□□ -1.3
SSM4P40318 YPL199CYPL199C 723 nt6.9□□□□□ -1.3
SSM4P40318 YJR124CYJR124C 1347 nt6.9□□□□□ -1.31
SSM4P40318 BUD7YOR299W 2241 nt6.89□□□□□ -1.31
SSM4P40318 YGR153WYGR153W 654 nt6.89□□□□□ -1.31
SSM4P40318 LPL1YOR059C 1353 nt6.89□□□□□ -1.31
SSM4P40318 NTH2YBR001C 2343 nt6.88□□□□□ -1.31
SSM4P40318 MRPL39YML009C 213 nt6.88□□□□□ -1.31
SSM4P40318 NMD5YJR132W 3147 nt6.88□□□□□ -1.31
SSM4P40318 YIR017W-AYIR017W-A 600 nt6.87□□□□□ -1.31
SSM4P40318 ARG8YOL140W 1272 nt6.87□□□□□ -1.31
SSM4P40318 BUD22YMR014W 1560 nt6.86□□□□□ -1.31
SSM4P40318 HSP104YLL026W 2727 nt6.86□□□□□ -1.31
SSM4P40318 YLF2YHL014C 1218 nt6.86□□□□□ -1.31
SSM4P40318 CTR2YHR175W 570 nt6.86□□□□□ -1.31
SSM4P40318 GAT3YLR013W 426 nt6.86□□□□□ -1.31
SSM4P40318 YAR019W-AYAR019W-A 333 nt6.86□□□□□ -1.31
SSM4P40318 SLZ1YNL196C 897 nt6.86□□□□□ -1.31
SSM4P40318 RSC2YLR357W 2670 nt6.86□□□□□ -1.31
SSM4P40318 GRS1YBR121C 2004 nt6.85□□□□□ -1.31
SSM4P40318 UBX7YBR273C 1311 nt6.85□□□□□ -1.31
SSM4P40318 HSP31YDR533C 714 nt6.85□□□□□ -1.31
SSM4P40318 GCN20YFR009W 2259 nt6.85□□□□□ -1.31
SSM4P40318 DRS1YLL008W 2259 nt6.84□□□□□ -1.31
SSM4P40318 MHF2YDL160C-A 243 nt6.84□□□□□ -1.31
SSM4P40318 YFR006WYFR006W 1608 nt6.84□□□□□ -1.31
SSM4P40318 LSG1YGL099W 1923 nt6.84□□□□□ -1.31
SSM4P40318 RRP3YHR065C 1506 nt6.84□□□□□ -1.31
SSM4P40318 MPA43YNL249C 1629 nt6.83□□□□□ -1.32
SSM4P40318 YEF1YEL041W 1488 nt6.83□□□□□ -1.32
SSM4P40318 ACS2YLR153C 2052 nt6.82□□□□□ -1.32
SSM4P40318 SWI3YJL176C 2478 nt6.82□□□□□ -1.32
SSM4P40318 PAP2YOL115W 1755 nt6.82□□□□□ -1.32
SSM4P40318 RPL28YGL103W 450 nt6.81□□□□□ -1.32
SSM4P40318 YJL193WYJL193W 1209 nt6.81□□□□□ -1.32
SSM4P40318 RPP0YLR340W 939 nt6.81□□□□□ -1.32
SSM4P40318 JIP4YDR475C 2631 nt6.81□□□□□ -1.32
SSM4P40318 RTC5YOR118W 1704 nt6.81□□□□□ -1.32
SSM4P40318 YBL006W-AYBL006W-A 150 nt6.8□□□□□ -1.32
SSM4P40318 MGS1YNL218W 1764 nt6.8□□□□□ -1.32
SSM4P40318 ASA1YPR085C 1332 nt6.8□□□□□ -1.32
SSM4P40318 HXK2YGL253W 1461 nt6.8□□□□□ -1.32
SSM4P40318 YMR196WYMR196W 3267 nt6.8□□□□□ -1.32
SSM4P40318 AAD4YDL243C 990 nt6.79□□□□□ -1.32
SSM4P40318 SFT2YBL102W 648 nt6.79□□□□□ -1.32
SSM4P40318 SKG3YLR187W 3081 nt6.79□□□□□ -1.32
SSM4P40318 PRO2YOR323C 1371 nt6.79□□□□□ -1.32
SSM4P40318 SIF2YBR103W 1608 nt6.79□□□□□ -1.32
SSM4P40318 SCS2YER120W 735 nt6.78□□□□□ -1.32
SSM4P40318 DCD1YHR144C 939 nt6.78□□□□□ -1.32
SSM4P40318 CCS1YMR038C 750 nt6.78□□□□□ -1.32
SSM4P40318 DCI1YOR180C 816 nt6.78□□□□□ -1.32
SSM4P40318 PRM1YNL279W 1986 nt6.78□□□□□ -1.32
SSM4P40318 SUP35YDR172W 2058 nt6.78□□□□□ -1.32
SSM4P40318 YIL171W-AYIL171W-A 453 nt6.77□□□□□ -1.32
SSM4P40318 YJL220WYJL220W 453 nt6.77□□□□□ -1.32
SSM4P40318 CDC11YJR076C 1248 nt6.77□□□□□ -1.32
SSM4P40318 YIF1YNL263C 945 nt6.77□□□□□ -1.32
SSM4P40318 MKK1YOR231W 1527 nt6.77□□□□□ -1.33
SSM4P40318 ERG4YGL012W 1422 nt6.77□□□□□ -1.33
SSM4P40318 STE7YDL159W 1548 nt6.77□□□□□ -1.33
SSM4P40318 RCK1YGL158W 1539 nt6.77□□□□□ -1.33
SSM4P40318 APC4YDR118W 1959 nt6.76□□□□□ -1.33
SSM4P40318 YEH2YLR020C 1617 nt6.76□□□□□ -1.33
SSM4P40318 YLR296WYLR296W 327 nt6.76□□□□□ -1.33
SSM4P40318 HIR2YOR038C 2628 nt6.76□□□□□ -1.33
SSM4P40318 FUM1YPL262W 1467 nt6.76□□□□□ -1.33
SSM4P40318 YIR007WYIR007W 2295 nt6.76□□□□□ -1.33
SSM4P40318 SAP30YMR263W 606 nt6.76□□□□□ -1.33
SSM4P40318 RCL1YOL010W 1104 nt6.76□□□□□ -1.33
SSM4P40318 HAP1YLR256W 4509 nt6.75□□□□□ -1.33
SSM4P40318 KAR2YJL034W 2049 nt6.75□□□□□ -1.33
SSM4P40318 SUT1YGL162W 900 nt6.75□□□□□ -1.33
SSM4P40318 YNL134CYNL134C 1131 nt6.75□□□□□ -1.33
SSM4P40318 DPB2YPR175W 2070 nt6.74□□□□□ -1.33
SSM4P40318 ARF2YDL137W 546 nt6.74□□□□□ -1.33
SSM4P40318 YIR020W-AYIR020W-A 243 nt6.74□□□□□ -1.33
SSM4P40318 PCL1YNL289W 840 nt6.74□□□□□ -1.33
SSM4P40318 MSS116YDR194C 1995 nt6.73□□□□□ -1.33
SSM4P40318 RAD30YDR419W 1899 nt6.73□□□□□ -1.33
SSM4P40318 YEL067CYEL067C 588 nt6.73□□□□□ -1.33
SSM4P40318 YGR066CYGR066C 879 nt6.73□□□□□ -1.33
SSM4P40318 COS6YGR295C 1146 nt6.73□□□□□ -1.33
SSM4P40318 YHR140WYHR140W 720 nt6.73□□□□□ -1.33
SSM4P40318 AIM3YBR108W 2844 nt6.72□□□□□ -1.33
SSM4P40318 APM4YOL062C 1476 nt6.72□□□□□ -1.33
SSM4P40318 MSN2YMR037C 2115 nt6.72□□□□□ -1.33
SSM4P40318 YDL012CYDL012C 324 nt6.72□□□□□ -1.33
SSM4P40318 YDL023CYDL023C 321 nt6.72□□□□□ -1.33
SSM4P40318 OAZ1YPL052W 879 nt6.72□□□□□ -1.33
Retrieved 100 of 7,029 protein–RNA pairs in 21.7 ms