Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
PDE6BP35913 AL138724.1-201ENST00000606771 1088 ntBASIC28.87■■■□□ 2.21
PDE6BP35913 AC011298.3-201ENST00000615796 283 ntBASIC28.87■■■□□ 2.21
PDE6BP35913 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
PDE6BP35913 IRS3P-201ENST00000223076 1006 ntBASIC28.86■■■□□ 2.21
PDE6BP35913 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
PDE6BP35913 PTCHD3P2-201ENST00000424937 1205 ntBASIC28.86■■■□□ 2.21
PDE6BP35913 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC28.86■■■□□ 2.21
PDE6BP35913 AC099791.2-201ENST00000605725 427 ntBASIC28.86■■■□□ 2.21
PDE6BP35913 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC28.86■■■□□ 2.21
PDE6BP35913 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
PDE6BP35913 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
PDE6BP35913 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC28.85■■■□□ 2.21
PDE6BP35913 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
PDE6BP35913 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
PDE6BP35913 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
PDE6BP35913 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
PDE6BP35913 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
PDE6BP35913 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC28.84■■■□□ 2.21
PDE6BP35913 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC28.84■■■□□ 2.21
PDE6BP35913 AC008764.7-201ENST00000593779 1081 ntBASIC28.84■■■□□ 2.21
PDE6BP35913 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC28.84■■■□□ 2.21
PDE6BP35913 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC28.84■■■□□ 2.21
PDE6BP35913 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
PDE6BP35913 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
PDE6BP35913 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
PDE6BP35913 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
PDE6BP35913 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
PDE6BP35913 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
PDE6BP35913 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC28.83■■■□□ 2.21
PDE6BP35913 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC28.83■■■□□ 2.21
PDE6BP35913 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
PDE6BP35913 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
PDE6BP35913 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
PDE6BP35913 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC28.82■■■□□ 2.2
PDE6BP35913 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
PDE6BP35913 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC28.82■■■□□ 2.2
PDE6BP35913 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC28.82■■■□□ 2.2
PDE6BP35913 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
PDE6BP35913 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC28.81■■■□□ 2.2
PDE6BP35913 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
PDE6BP35913 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC28.81■■■□□ 2.2
PDE6BP35913 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
PDE6BP35913 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC28.8■■■□□ 2.2
PDE6BP35913 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC28.8■■■□□ 2.2
PDE6BP35913 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC28.8■■■□□ 2.2
PDE6BP35913 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PDE6BP35913 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
PDE6BP35913 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC28.8■■■□□ 2.2
PDE6BP35913 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC28.79■■■□□ 2.2
PDE6BP35913 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
PDE6BP35913 AC099791.1-201ENST00000416440 715 ntBASIC28.79■■■□□ 2.2
PDE6BP35913 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC28.79■■■□□ 2.2
PDE6BP35913 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC28.79■■■□□ 2.2
PDE6BP35913 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
PDE6BP35913 ERN1-208ENST00000606895 2068 ntBASIC28.79■■■□□ 2.2
PDE6BP35913 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC28.79■■■□□ 2.2
PDE6BP35913 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
PDE6BP35913 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC28.78■■■□□ 2.2
PDE6BP35913 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC28.78■■■□□ 2.2
PDE6BP35913 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
PDE6BP35913 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC28.78■■■□□ 2.2
PDE6BP35913 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC28.78■■■□□ 2.2
PDE6BP35913 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
PDE6BP35913 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
PDE6BP35913 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC28.77■■■□□ 2.2
PDE6BP35913 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
PDE6BP35913 JTB-203ENST00000368589 1216 ntTSL 2 BASIC28.77■■■□□ 2.2
PDE6BP35913 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC28.77■■■□□ 2.2
PDE6BP35913 RHOF-204ENST00000537265 699 ntTSL 2 BASIC28.77■■■□□ 2.2
PDE6BP35913 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
PDE6BP35913 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
PDE6BP35913 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
PDE6BP35913 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC28.76■■■□□ 2.19
PDE6BP35913 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC28.76■■■□□ 2.19
PDE6BP35913 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC28.76■■■□□ 2.19
PDE6BP35913 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC28.76■■■□□ 2.19
PDE6BP35913 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
PDE6BP35913 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
PDE6BP35913 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
PDE6BP35913 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC28.75■■■□□ 2.19
PDE6BP35913 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC28.75■■■□□ 2.19
PDE6BP35913 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC28.75■■■□□ 2.19
PDE6BP35913 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC28.75■■■□□ 2.19
PDE6BP35913 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
PDE6BP35913 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC28.74■■■□□ 2.19
PDE6BP35913 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC28.74■■■□□ 2.19
PDE6BP35913 AC131274.2-201ENST00000580697 1507 ntBASIC28.74■■■□□ 2.19
PDE6BP35913 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
PDE6BP35913 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
PDE6BP35913 HES6-206ENST00000409574 738 ntTSL 2 BASIC28.73■■■□□ 2.19
PDE6BP35913 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
PDE6BP35913 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
PDE6BP35913 STK32C-205ENST00000456004 607 ntTSL 2 BASIC28.73■■■□□ 2.19
PDE6BP35913 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
PDE6BP35913 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC28.73■■■□□ 2.19
PDE6BP35913 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
PDE6BP35913 AC009102.2-201ENST00000606772 1639 ntBASIC28.72■■■□□ 2.19
PDE6BP35913 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC28.72■■■□□ 2.19
PDE6BP35913 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms