Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
SAA4P35542 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.74■□□□□ 0.59
SAA4P35542 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SAA4P35542 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.74■□□□□ 0.59
SAA4P35542 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SAA4P35542 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.74■□□□□ 0.59
SAA4P35542 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SAA4P35542 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SAA4P35542 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SAA4P35542 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.73■□□□□ 0.59
SAA4P35542 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SAA4P35542 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SAA4P35542 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SAA4P35542 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SAA4P35542 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SAA4P35542 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SAA4P35542 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.72■□□□□ 0.59
SAA4P35542 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SAA4P35542 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SAA4P35542 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SAA4P35542 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SAA4P35542 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SAA4P35542 AC004448.1-201ENST00000458332 883 ntBASIC18.72■□□□□ 0.59
SAA4P35542 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.72■□□□□ 0.59
SAA4P35542 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.72■□□□□ 0.59
SAA4P35542 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.72■□□□□ 0.59
SAA4P35542 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.72■□□□□ 0.59
SAA4P35542 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SAA4P35542 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SAA4P35542 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SAA4P35542 MIR6722-201ENST00000617286 78 ntBASIC18.71■□□□□ 0.59
SAA4P35542 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SAA4P35542 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.71■□□□□ 0.59
SAA4P35542 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SAA4P35542 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SAA4P35542 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SAA4P35542 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SAA4P35542 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.7■□□□□ 0.58
SAA4P35542 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.7■□□□□ 0.58
SAA4P35542 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SAA4P35542 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.7■□□□□ 0.58
SAA4P35542 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.7■□□□□ 0.58
SAA4P35542 AL117332.1-201ENST00000622628 974 ntBASIC18.7■□□□□ 0.58
SAA4P35542 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SAA4P35542 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SAA4P35542 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SAA4P35542 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC18.7■□□□□ 0.58
SAA4P35542 AC131274.2-201ENST00000580697 1507 ntBASIC18.69■□□□□ 0.58
SAA4P35542 AC020928.2-201ENST00000588717 2197 ntBASIC18.69■□□□□ 0.58
SAA4P35542 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SAA4P35542 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SAA4P35542 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SAA4P35542 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SAA4P35542 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.69■□□□□ 0.58
SAA4P35542 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.69■□□□□ 0.58
SAA4P35542 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SAA4P35542 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.69■□□□□ 0.58
SAA4P35542 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.69■□□□□ 0.58
SAA4P35542 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SAA4P35542 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SAA4P35542 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SAA4P35542 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.68■□□□□ 0.58
SAA4P35542 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.68■□□□□ 0.58
SAA4P35542 HLA-L-211ENST00000482052 1765 ntBASIC18.68■□□□□ 0.58
SAA4P35542 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
SAA4P35542 AL022069.1-201ENST00000568025 1636 ntBASIC18.68■□□□□ 0.58
SAA4P35542 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.68■□□□□ 0.58
SAA4P35542 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.68■□□□□ 0.58
SAA4P35542 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.68■□□□□ 0.58
SAA4P35542 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.68■□□□□ 0.58
SAA4P35542 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.68■□□□□ 0.58
SAA4P35542 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SAA4P35542 AP003733.4-201ENST00000623785 1697 ntBASIC18.68■□□□□ 0.58
SAA4P35542 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SAA4P35542 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SAA4P35542 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.68■□□□□ 0.58
SAA4P35542 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SAA4P35542 AC008406.3-201ENST00000620001 1374 ntBASIC18.68■□□□□ 0.58
SAA4P35542 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.68■□□□□ 0.58
SAA4P35542 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SAA4P35542 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SAA4P35542 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.67■□□□□ 0.58
SAA4P35542 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SAA4P35542 AC142381.3-201ENST00000568208 1670 ntBASIC18.67■□□□□ 0.58
SAA4P35542 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SAA4P35542 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.67■□□□□ 0.58
SAA4P35542 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.67■□□□□ 0.58
SAA4P35542 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.67■□□□□ 0.58
SAA4P35542 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.67■□□□□ 0.58
SAA4P35542 MIR3621-201ENST00000580529 85 ntBASIC18.67■□□□□ 0.58
SAA4P35542 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.67■□□□□ 0.58
SAA4P35542 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SAA4P35542 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SAA4P35542 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SAA4P35542 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SAA4P35542 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SAA4P35542 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.66■□□□□ 0.58
SAA4P35542 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.66■□□□□ 0.58
SAA4P35542 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.66■□□□□ 0.58
SAA4P35542 AL356740.2-201ENST00000601559 647 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms