Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 SHD-204ENST00000599689 1729 ntTSL 5 BASIC26.89■■□□□ 1.9
CDKL5O76039 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CDKL5O76039 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26.89■■□□□ 1.89
CDKL5O76039 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
CDKL5O76039 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CDKL5O76039 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
CDKL5O76039 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.88■■□□□ 1.89
CDKL5O76039 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CDKL5O76039 YBX1P4-201ENST00000392794 808 ntBASIC26.88■■□□□ 1.89
CDKL5O76039 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CDKL5O76039 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.88■■□□□ 1.89
CDKL5O76039 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC26.88■■□□□ 1.89
CDKL5O76039 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CDKL5O76039 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CDKL5O76039 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CDKL5O76039 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
CDKL5O76039 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CDKL5O76039 AC103834.1-201ENST00000520383 144 ntBASIC26.87■■□□□ 1.89
CDKL5O76039 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
CDKL5O76039 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC26.87■■□□□ 1.89
CDKL5O76039 THRA-202ENST00000394121 2260 ntTSL 2 BASIC26.87■■□□□ 1.89
CDKL5O76039 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CDKL5O76039 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC26.86■■□□□ 1.89
CDKL5O76039 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
CDKL5O76039 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
CDKL5O76039 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CDKL5O76039 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CDKL5O76039 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
CDKL5O76039 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.86■■□□□ 1.89
CDKL5O76039 CD37-213ENST00000598095 1598 ntTSL 2 BASIC26.86■■□□□ 1.89
CDKL5O76039 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.86■■□□□ 1.89
CDKL5O76039 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26.86■■□□□ 1.89
CDKL5O76039 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
CDKL5O76039 MIR4281-201ENST00000580852 62 ntBASIC26.85■■□□□ 1.89
CDKL5O76039 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDKL5O76039 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
CDKL5O76039 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CDKL5O76039 KRT8P33-201ENST00000508125 1423 ntBASIC26.84■■□□□ 1.89
CDKL5O76039 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
CDKL5O76039 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC26.84■■□□□ 1.89
CDKL5O76039 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CDKL5O76039 AL022069.1-201ENST00000568025 1636 ntBASIC26.83■■□□□ 1.89
CDKL5O76039 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
CDKL5O76039 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.83■■□□□ 1.89
CDKL5O76039 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CDKL5O76039 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CDKL5O76039 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
CDKL5O76039 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC26.82■■□□□ 1.88
CDKL5O76039 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.82■■□□□ 1.88
CDKL5O76039 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CDKL5O76039 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.82■■□□□ 1.88
CDKL5O76039 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CDKL5O76039 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC26.82■■□□□ 1.88
CDKL5O76039 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CDKL5O76039 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
CDKL5O76039 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CDKL5O76039 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
CDKL5O76039 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
CDKL5O76039 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.81■■□□□ 1.88
CDKL5O76039 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.81■■□□□ 1.88
CDKL5O76039 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CDKL5O76039 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
CDKL5O76039 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
CDKL5O76039 STK32C-205ENST00000456004 607 ntTSL 2 BASIC26.8■■□□□ 1.88
CDKL5O76039 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC26.8■■□□□ 1.88
CDKL5O76039 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
CDKL5O76039 AC103724.3-201ENST00000564481 992 ntBASIC26.8■■□□□ 1.88
CDKL5O76039 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.8■■□□□ 1.88
CDKL5O76039 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
CDKL5O76039 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CDKL5O76039 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CDKL5O76039 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC26.79■■□□□ 1.88
CDKL5O76039 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CDKL5O76039 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CDKL5O76039 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CDKL5O76039 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CDKL5O76039 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CDKL5O76039 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC26.78■■□□□ 1.88
CDKL5O76039 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CDKL5O76039 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC26.78■■□□□ 1.88
CDKL5O76039 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CDKL5O76039 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CDKL5O76039 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CDKL5O76039 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CDKL5O76039 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CDKL5O76039 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CDKL5O76039 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
CDKL5O76039 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
CDKL5O76039 LBH-205ENST00000407930 756 ntTSL 2 BASIC26.77■■□□□ 1.88
CDKL5O76039 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CDKL5O76039 ABCB10P4-201ENST00000566803 2184 ntBASIC26.77■■□□□ 1.88
CDKL5O76039 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
CDKL5O76039 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC26.76■■□□□ 1.87
CDKL5O76039 AF131216.4-201ENST00000638924 1588 ntBASIC26.76■■□□□ 1.87
CDKL5O76039 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC26.76■■□□□ 1.87
CDKL5O76039 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
CDKL5O76039 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CDKL5O76039 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CDKL5O76039 AC131274.2-201ENST00000580697 1507 ntBASIC26.75■■□□□ 1.87
CDKL5O76039 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms