Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CUBNO60494 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.72■□□□□ 0.59
CUBNO60494 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.71■□□□□ 0.59
CUBNO60494 AC096887.2-201ENST00000623443 1957 ntBASIC18.71■□□□□ 0.59
CUBNO60494 YBX1P1-201ENST00000445822 960 ntBASIC18.71■□□□□ 0.59
CUBNO60494 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.71■□□□□ 0.59
CUBNO60494 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CUBNO60494 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.71■□□□□ 0.59
CUBNO60494 DUX4L2-201ENST00000561772 1275 ntBASIC18.71■□□□□ 0.59
CUBNO60494 RAP2CP1-201ENST00000605103 478 ntBASIC18.71■□□□□ 0.59
CUBNO60494 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.71■□□□□ 0.59
CUBNO60494 DUX4L6-201ENST00000626483 1275 ntBASIC18.71■□□□□ 0.59
CUBNO60494 DUX4L1-201ENST00000627662 1275 ntBASIC18.71■□□□□ 0.59
CUBNO60494 DUX4L8-201ENST00000629013 1275 ntBASIC18.71■□□□□ 0.59
CUBNO60494 DUX4L3-201ENST00000630187 1275 ntBASIC18.71■□□□□ 0.59
CUBNO60494 DUX4L7-201ENST00000630678 1275 ntBASIC18.71■□□□□ 0.59
CUBNO60494 DUX4L5-201ENST00000630834 1275 ntBASIC18.71■□□□□ 0.59
CUBNO60494 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CUBNO60494 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.7■□□□□ 0.58
CUBNO60494 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
CUBNO60494 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CUBNO60494 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CUBNO60494 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CUBNO60494 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CUBNO60494 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CUBNO60494 AC004911.1-201ENST00000416316 871 ntBASIC18.7■□□□□ 0.58
CUBNO60494 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.7■□□□□ 0.58
CUBNO60494 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC18.69■□□□□ 0.58
CUBNO60494 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.69■□□□□ 0.58
CUBNO60494 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.69■□□□□ 0.58
CUBNO60494 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CUBNO60494 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CUBNO60494 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CUBNO60494 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CUBNO60494 AC099791.1-201ENST00000416440 715 ntBASIC18.69■□□□□ 0.58
CUBNO60494 DUX4L19-201ENST00000557448 1267 ntBASIC18.69■□□□□ 0.58
CUBNO60494 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CUBNO60494 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CUBNO60494 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CUBNO60494 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CUBNO60494 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CUBNO60494 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.68■□□□□ 0.58
CUBNO60494 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.68■□□□□ 0.58
CUBNO60494 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.68■□□□□ 0.58
CUBNO60494 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.68■□□□□ 0.58
CUBNO60494 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CUBNO60494 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CUBNO60494 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CUBNO60494 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CUBNO60494 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.67■□□□□ 0.58
CUBNO60494 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CUBNO60494 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CUBNO60494 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.67■□□□□ 0.58
CUBNO60494 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.67■□□□□ 0.58
CUBNO60494 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CUBNO60494 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CUBNO60494 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CUBNO60494 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CUBNO60494 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CUBNO60494 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
CUBNO60494 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
CUBNO60494 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CUBNO60494 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.66■□□□□ 0.58
CUBNO60494 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CUBNO60494 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CUBNO60494 ERN1-208ENST00000606895 2068 ntBASIC18.65■□□□□ 0.58
CUBNO60494 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC18.65■□□□□ 0.58
CUBNO60494 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC18.65■□□□□ 0.58
CUBNO60494 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.65■□□□□ 0.58
CUBNO60494 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
CUBNO60494 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CUBNO60494 AC090877.2-201ENST00000558441 1738 ntBASIC18.65■□□□□ 0.58
CUBNO60494 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.65■□□□□ 0.58
CUBNO60494 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CUBNO60494 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CUBNO60494 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CUBNO60494 AC142472.1-201ENST00000612013 1741 ntBASIC18.65■□□□□ 0.58
CUBNO60494 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CUBNO60494 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CUBNO60494 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
CUBNO60494 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CUBNO60494 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CUBNO60494 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CUBNO60494 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CUBNO60494 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC18.64■□□□□ 0.57
CUBNO60494 ABHD17AP1-201ENST00000358206 933 ntBASIC18.64■□□□□ 0.57
CUBNO60494 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CUBNO60494 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CUBNO60494 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CUBNO60494 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CUBNO60494 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CUBNO60494 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CUBNO60494 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CUBNO60494 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.63■□□□□ 0.57
CUBNO60494 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CUBNO60494 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.63■□□□□ 0.57
CUBNO60494 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.63■□□□□ 0.57
CUBNO60494 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.63■□□□□ 0.57
CUBNO60494 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CUBNO60494 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms