Protein–RNA interactions for Protein: A6NL88

SHISA7, Protein shisa-7, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7A6NL88 AL162430.1-201ENST00000480705 870 ntBASIC23.63■■□□□ 1.37
SHISA7A6NL88 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.63■■□□□ 1.37
SHISA7A6NL88 CA15P2-201ENST00000611168 834 ntBASIC23.63■■□□□ 1.37
SHISA7A6NL88 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.63■■□□□ 1.37
SHISA7A6NL88 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
SHISA7A6NL88 SYT6-210ENST00000641643 1587 ntBASIC23.62■■□□□ 1.37
SHISA7A6NL88 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SHISA7A6NL88 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.62■■□□□ 1.37
SHISA7A6NL88 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.62■■□□□ 1.37
SHISA7A6NL88 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.62■■□□□ 1.37
SHISA7A6NL88 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SHISA7A6NL88 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SHISA7A6NL88 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SHISA7A6NL88 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SHISA7A6NL88 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SHISA7A6NL88 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
SHISA7A6NL88 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SHISA7A6NL88 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.61■■□□□ 1.37
SHISA7A6NL88 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SHISA7A6NL88 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SHISA7A6NL88 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.61■■□□□ 1.37
SHISA7A6NL88 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SHISA7A6NL88 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.6■■□□□ 1.37
SHISA7A6NL88 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.6■■□□□ 1.37
SHISA7A6NL88 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SHISA7A6NL88 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SHISA7A6NL88 RASA4CP-201ENST00000424092 1398 ntBASIC23.6■■□□□ 1.37
SHISA7A6NL88 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
SHISA7A6NL88 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
SHISA7A6NL88 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SHISA7A6NL88 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SHISA7A6NL88 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SHISA7A6NL88 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.59■■□□□ 1.37
SHISA7A6NL88 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.59■■□□□ 1.37
SHISA7A6NL88 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SHISA7A6NL88 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.59■■□□□ 1.37
SHISA7A6NL88 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
SHISA7A6NL88 AC131274.2-201ENST00000580697 1507 ntBASIC23.59■■□□□ 1.37
SHISA7A6NL88 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SHISA7A6NL88 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SHISA7A6NL88 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.58■■□□□ 1.37
SHISA7A6NL88 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.58■■□□□ 1.37
SHISA7A6NL88 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.58■■□□□ 1.37
SHISA7A6NL88 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SHISA7A6NL88 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SHISA7A6NL88 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SHISA7A6NL88 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
SHISA7A6NL88 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SHISA7A6NL88 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.57■■□□□ 1.36
SHISA7A6NL88 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
SHISA7A6NL88 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
SHISA7A6NL88 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
SHISA7A6NL88 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SHISA7A6NL88 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
SHISA7A6NL88 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SHISA7A6NL88 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.56■■□□□ 1.36
SHISA7A6NL88 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.56■■□□□ 1.36
SHISA7A6NL88 AC099791.2-201ENST00000605725 427 ntBASIC23.56■■□□□ 1.36
SHISA7A6NL88 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.56■■□□□ 1.36
SHISA7A6NL88 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SHISA7A6NL88 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SHISA7A6NL88 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SHISA7A6NL88 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SHISA7A6NL88 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.55■■□□□ 1.36
SHISA7A6NL88 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
SHISA7A6NL88 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SHISA7A6NL88 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SHISA7A6NL88 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.54■■□□□ 1.36
SHISA7A6NL88 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.54■■□□□ 1.36
SHISA7A6NL88 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.54■■□□□ 1.36
SHISA7A6NL88 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.54■■□□□ 1.36
SHISA7A6NL88 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SHISA7A6NL88 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SHISA7A6NL88 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.53■■□□□ 1.36
SHISA7A6NL88 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.53■■□□□ 1.36
SHISA7A6NL88 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.53■■□□□ 1.36
SHISA7A6NL88 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.53■■□□□ 1.36
SHISA7A6NL88 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SHISA7A6NL88 AC010501.1-201ENST00000606270 1962 ntBASIC23.52■■□□□ 1.36
SHISA7A6NL88 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.52■■□□□ 1.36
SHISA7A6NL88 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.52■■□□□ 1.36
SHISA7A6NL88 AC027682.1-201ENST00000562846 899 ntBASIC23.52■■□□□ 1.36
SHISA7A6NL88 AC092171.4-201ENST00000609130 632 ntBASIC23.52■■□□□ 1.36
SHISA7A6NL88 AC011298.3-201ENST00000615796 283 ntBASIC23.52■■□□□ 1.36
SHISA7A6NL88 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.52■■□□□ 1.36
SHISA7A6NL88 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
SHISA7A6NL88 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SHISA7A6NL88 AC009102.2-201ENST00000606772 1639 ntBASIC23.51■■□□□ 1.35
SHISA7A6NL88 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.51■■□□□ 1.35
SHISA7A6NL88 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SHISA7A6NL88 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
SHISA7A6NL88 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
SHISA7A6NL88 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SHISA7A6NL88 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SHISA7A6NL88 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.51■■□□□ 1.35
SHISA7A6NL88 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SHISA7A6NL88 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SHISA7A6NL88 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.5■■□□□ 1.35
SHISA7A6NL88 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC23.5■■□□□ 1.35
SHISA7A6NL88 AC008764.7-201ENST00000593779 1081 ntBASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms