Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
TMEM88BA6NKF7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
TMEM88BA6NKF7 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
TMEM88BA6NKF7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
TMEM88BA6NKF7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
TMEM88BA6NKF7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC27.47■■□□□ 1.99
TMEM88BA6NKF7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC27.47■■□□□ 1.99
TMEM88BA6NKF7 AC245100.8-202ENST00000629247 1058 ntBASIC27.47■■□□□ 1.99
TMEM88BA6NKF7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
TMEM88BA6NKF7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
TMEM88BA6NKF7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
TMEM88BA6NKF7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.99
TMEM88BA6NKF7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC27.45■■□□□ 1.99
TMEM88BA6NKF7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
TMEM88BA6NKF7 AC123595.1-201ENST00000440769 1046 ntBASIC27.45■■□□□ 1.98
TMEM88BA6NKF7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC27.45■■□□□ 1.98
TMEM88BA6NKF7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC27.45■■□□□ 1.98
TMEM88BA6NKF7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC27.45■■□□□ 1.98
TMEM88BA6NKF7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
TMEM88BA6NKF7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC27.44■■□□□ 1.98
TMEM88BA6NKF7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
TMEM88BA6NKF7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
TMEM88BA6NKF7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
TMEM88BA6NKF7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
TMEM88BA6NKF7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC27.44■■□□□ 1.98
TMEM88BA6NKF7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
TMEM88BA6NKF7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
TMEM88BA6NKF7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
TMEM88BA6NKF7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC27.43■■□□□ 1.98
TMEM88BA6NKF7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
TMEM88BA6NKF7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC27.43■■□□□ 1.98
TMEM88BA6NKF7 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
TMEM88BA6NKF7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC27.42■■□□□ 1.98
TMEM88BA6NKF7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC27.42■■□□□ 1.98
TMEM88BA6NKF7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
TMEM88BA6NKF7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC27.41■■□□□ 1.98
TMEM88BA6NKF7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
TMEM88BA6NKF7 AC027612.3-201ENST00000413684 1047 ntBASIC27.41■■□□□ 1.98
TMEM88BA6NKF7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC27.41■■□□□ 1.98
TMEM88BA6NKF7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC27.41■■□□□ 1.98
TMEM88BA6NKF7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC27.41■■□□□ 1.98
TMEM88BA6NKF7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
TMEM88BA6NKF7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
TMEM88BA6NKF7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
TMEM88BA6NKF7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC27.4■■□□□ 1.98
TMEM88BA6NKF7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
TMEM88BA6NKF7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
TMEM88BA6NKF7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
TMEM88BA6NKF7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
TMEM88BA6NKF7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
TMEM88BA6NKF7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC27.4■■□□□ 1.98
TMEM88BA6NKF7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC27.4■■□□□ 1.98
TMEM88BA6NKF7 NTF6G-201ENST00000591094 616 ntBASIC27.4■■□□□ 1.98
TMEM88BA6NKF7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC27.4■■□□□ 1.98
TMEM88BA6NKF7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC27.39■■□□□ 1.98
TMEM88BA6NKF7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC27.39■■□□□ 1.98
TMEM88BA6NKF7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC27.39■■□□□ 1.98
TMEM88BA6NKF7 TMEM191A-211ENST00000637163 1067 ntBASIC27.39■■□□□ 1.98
TMEM88BA6NKF7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.97
TMEM88BA6NKF7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
TMEM88BA6NKF7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TMEM88BA6NKF7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
TMEM88BA6NKF7 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TMEM88BA6NKF7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
TMEM88BA6NKF7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TMEM88BA6NKF7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
TMEM88BA6NKF7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
TMEM88BA6NKF7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
TMEM88BA6NKF7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
TMEM88BA6NKF7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC27.37■■□□□ 1.97
TMEM88BA6NKF7 AL358852.1-201ENST00000623174 1268 ntBASIC27.37■■□□□ 1.97
TMEM88BA6NKF7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
TMEM88BA6NKF7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
TMEM88BA6NKF7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
TMEM88BA6NKF7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
TMEM88BA6NKF7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
TMEM88BA6NKF7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
TMEM88BA6NKF7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC27.36■■□□□ 1.97
TMEM88BA6NKF7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
TMEM88BA6NKF7 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC27.36■■□□□ 1.97
TMEM88BA6NKF7 AC126544.1-201ENST00000580842 1059 ntBASIC27.36■■□□□ 1.97
TMEM88BA6NKF7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
TMEM88BA6NKF7 DRD5P2-201ENST00000421395 2012 ntBASIC27.36■■□□□ 1.97
TMEM88BA6NKF7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
TMEM88BA6NKF7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
TMEM88BA6NKF7 REST-206ENST00000612429 1376 ntTSL 5 BASIC27.35■■□□□ 1.97
TMEM88BA6NKF7 REST-207ENST00000616975 1370 ntTSL 5 BASIC27.35■■□□□ 1.97
TMEM88BA6NKF7 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
TMEM88BA6NKF7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC27.35■■□□□ 1.97
TMEM88BA6NKF7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
TMEM88BA6NKF7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC27.35■■□□□ 1.97
TMEM88BA6NKF7 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
TMEM88BA6NKF7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
TMEM88BA6NKF7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC27.35■■□□□ 1.97
TMEM88BA6NKF7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TMEM88BA6NKF7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TMEM88BA6NKF7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC27.34■■□□□ 1.97
TMEM88BA6NKF7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC27.34■■□□□ 1.97
TMEM88BA6NKF7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC27.34■■□□□ 1.97
TMEM88BA6NKF7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms