Protein–RNA interactions for Protein: A6NFQ2

TCAF2, TRPM8 channel-associated factor 2, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF2A6NFQ2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TCAF2A6NFQ2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
TCAF2A6NFQ2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.81■■□□□ 1.4
TCAF2A6NFQ2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
TCAF2A6NFQ2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TCAF2A6NFQ2 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.81■■□□□ 1.4
TCAF2A6NFQ2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TCAF2A6NFQ2 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TCAF2A6NFQ2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.81■■□□□ 1.4
TCAF2A6NFQ2 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.81■■□□□ 1.4
TCAF2A6NFQ2 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.81■■□□□ 1.4
TCAF2A6NFQ2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
TCAF2A6NFQ2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
TCAF2A6NFQ2 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TCAF2A6NFQ2 AP003733.4-201ENST00000623785 1697 ntBASIC23.8■■□□□ 1.4
TCAF2A6NFQ2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TCAF2A6NFQ2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TCAF2A6NFQ2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
TCAF2A6NFQ2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.8■■□□□ 1.4
TCAF2A6NFQ2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TCAF2A6NFQ2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TCAF2A6NFQ2 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TCAF2A6NFQ2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TCAF2A6NFQ2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.79■■□□□ 1.4
TCAF2A6NFQ2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TCAF2A6NFQ2 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.79■■□□□ 1.4
TCAF2A6NFQ2 KRT16P3-201ENST00000439127 1283 ntBASIC23.79■■□□□ 1.4
TCAF2A6NFQ2 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.79■■□□□ 1.4
TCAF2A6NFQ2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TCAF2A6NFQ2 SNX5-217ENST00000606557 1087 ntBASIC23.79■■□□□ 1.4
TCAF2A6NFQ2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TCAF2A6NFQ2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TCAF2A6NFQ2 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TCAF2A6NFQ2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TCAF2A6NFQ2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.78■■□□□ 1.4
TCAF2A6NFQ2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TCAF2A6NFQ2 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TCAF2A6NFQ2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TCAF2A6NFQ2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.78■■□□□ 1.4
TCAF2A6NFQ2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.78■■□□□ 1.4
TCAF2A6NFQ2 MTDHP2-201ENST00000601468 714 ntBASIC23.78■■□□□ 1.4
TCAF2A6NFQ2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.78■■□□□ 1.4
TCAF2A6NFQ2 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TCAF2A6NFQ2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TCAF2A6NFQ2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.78■■□□□ 1.4
TCAF2A6NFQ2 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TCAF2A6NFQ2 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TCAF2A6NFQ2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
TCAF2A6NFQ2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
TCAF2A6NFQ2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
TCAF2A6NFQ2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.77■■□□□ 1.4
TCAF2A6NFQ2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.77■■□□□ 1.4
TCAF2A6NFQ2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.77■■□□□ 1.4
TCAF2A6NFQ2 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TCAF2A6NFQ2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.77■■□□□ 1.4
TCAF2A6NFQ2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TCAF2A6NFQ2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TCAF2A6NFQ2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
TCAF2A6NFQ2 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.76■■□□□ 1.39
TCAF2A6NFQ2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TCAF2A6NFQ2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TCAF2A6NFQ2 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TCAF2A6NFQ2 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.76■■□□□ 1.39
TCAF2A6NFQ2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.76■■□□□ 1.39
TCAF2A6NFQ2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
TCAF2A6NFQ2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.75■■□□□ 1.39
TCAF2A6NFQ2 AC138932.3-201ENST00000567634 1902 ntBASIC23.75■■□□□ 1.39
TCAF2A6NFQ2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TCAF2A6NFQ2 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.75■■□□□ 1.39
TCAF2A6NFQ2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.75■■□□□ 1.39
TCAF2A6NFQ2 AC010997.5-201ENST00000609182 354 ntBASIC23.75■■□□□ 1.39
TCAF2A6NFQ2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TCAF2A6NFQ2 HLA-L-211ENST00000482052 1765 ntBASIC23.75■■□□□ 1.39
TCAF2A6NFQ2 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
TCAF2A6NFQ2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.75■■□□□ 1.39
TCAF2A6NFQ2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.75■■□□□ 1.39
TCAF2A6NFQ2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.74■■□□□ 1.39
TCAF2A6NFQ2 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.74■■□□□ 1.39
TCAF2A6NFQ2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.74■■□□□ 1.39
TCAF2A6NFQ2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TCAF2A6NFQ2 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.74■■□□□ 1.39
TCAF2A6NFQ2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.74■■□□□ 1.39
TCAF2A6NFQ2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TCAF2A6NFQ2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TCAF2A6NFQ2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
TCAF2A6NFQ2 AC131274.2-201ENST00000580697 1507 ntBASIC23.74■■□□□ 1.39
TCAF2A6NFQ2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TCAF2A6NFQ2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TCAF2A6NFQ2 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TCAF2A6NFQ2 AC004448.1-201ENST00000458332 883 ntBASIC23.73■■□□□ 1.39
TCAF2A6NFQ2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TCAF2A6NFQ2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.72■■□□□ 1.39
TCAF2A6NFQ2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.72■■□□□ 1.39
TCAF2A6NFQ2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
TCAF2A6NFQ2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.72■■□□□ 1.39
TCAF2A6NFQ2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TCAF2A6NFQ2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.72■■□□□ 1.39
TCAF2A6NFQ2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TCAF2A6NFQ2 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TCAF2A6NFQ2 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms