Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
HFM1A2PYH4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC34.62■■■■□ 3.13
HFM1A2PYH4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC34.62■■■■□ 3.13
HFM1A2PYH4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
HFM1A2PYH4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC34.62■■■■□ 3.13
HFM1A2PYH4 CD72-202ENST00000378430 585 ntTSL 3 BASIC34.62■■■■□ 3.13
HFM1A2PYH4 MIR6722-201ENST00000617286 78 ntBASIC34.62■■■■□ 3.13
HFM1A2PYH4 HLA-L-211ENST00000482052 1765 ntBASIC34.62■■■■□ 3.13
HFM1A2PYH4 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC34.61■■■■□ 3.13
HFM1A2PYH4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC34.61■■■■□ 3.13
HFM1A2PYH4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC34.61■■■■□ 3.13
HFM1A2PYH4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC34.61■■■■□ 3.13
HFM1A2PYH4 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC34.61■■■■□ 3.13
HFM1A2PYH4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC34.61■■■■□ 3.13
HFM1A2PYH4 MIR6724-1-201ENST00000616420 92 ntBASIC34.61■■■■□ 3.13
HFM1A2PYH4 MIR6724-2-201ENST00000616483 92 ntBASIC34.61■■■■□ 3.13
HFM1A2PYH4 MIR6724-4-201ENST00000617390 92 ntBASIC34.61■■■■□ 3.13
HFM1A2PYH4 MIR6724-3-201ENST00000622482 92 ntBASIC34.61■■■■□ 3.13
HFM1A2PYH4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC34.61■■■■□ 3.13
HFM1A2PYH4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
HFM1A2PYH4 AC138932.3-201ENST00000567634 1902 ntBASIC34.6■■■■□ 3.13
HFM1A2PYH4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
HFM1A2PYH4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
HFM1A2PYH4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
HFM1A2PYH4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC34.59■■■■□ 3.13
HFM1A2PYH4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC34.59■■■■□ 3.13
HFM1A2PYH4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
HFM1A2PYH4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC34.59■■■■□ 3.13
HFM1A2PYH4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
HFM1A2PYH4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC34.58■■■■□ 3.13
HFM1A2PYH4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
HFM1A2PYH4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC34.58■■■■□ 3.13
HFM1A2PYH4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC34.58■■■■□ 3.13
HFM1A2PYH4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC34.58■■■■□ 3.13
HFM1A2PYH4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC34.58■■■■□ 3.13
HFM1A2PYH4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.13
HFM1A2PYH4 AP003733.4-201ENST00000623785 1697 ntBASIC34.57■■■■□ 3.12
HFM1A2PYH4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC34.57■■■■□ 3.12
HFM1A2PYH4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC34.56■■■■□ 3.12
HFM1A2PYH4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
HFM1A2PYH4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
HFM1A2PYH4 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
HFM1A2PYH4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC34.55■■■■□ 3.12
HFM1A2PYH4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC34.55■■■■□ 3.12
HFM1A2PYH4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
HFM1A2PYH4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC34.55■■■■□ 3.12
HFM1A2PYH4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC34.55■■■■□ 3.12
HFM1A2PYH4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC34.55■■■■□ 3.12
HFM1A2PYH4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC34.55■■■■□ 3.12
HFM1A2PYH4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC34.54■■■■□ 3.12
HFM1A2PYH4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
HFM1A2PYH4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC34.54■■■■□ 3.12
HFM1A2PYH4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC34.54■■■■□ 3.12
HFM1A2PYH4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
HFM1A2PYH4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC34.53■■■■□ 3.12
HFM1A2PYH4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC34.53■■■■□ 3.12
HFM1A2PYH4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
HFM1A2PYH4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
HFM1A2PYH4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
HFM1A2PYH4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC34.53■■■■□ 3.12
HFM1A2PYH4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC34.53■■■■□ 3.12
HFM1A2PYH4 MIR3621-201ENST00000580529 85 ntBASIC34.53■■■■□ 3.12
HFM1A2PYH4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC34.53■■■■□ 3.12
HFM1A2PYH4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC34.53■■■■□ 3.12
HFM1A2PYH4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
HFM1A2PYH4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC34.53■■■■□ 3.12
HFM1A2PYH4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC34.53■■■■□ 3.12
HFM1A2PYH4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
HFM1A2PYH4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC34.52■■■■□ 3.12
HFM1A2PYH4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC34.52■■■■□ 3.12
HFM1A2PYH4 AC131281.2-201ENST00000520478 145 ntBASIC34.52■■■■□ 3.12
HFM1A2PYH4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC34.51■■■■□ 3.12
HFM1A2PYH4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC34.51■■■■□ 3.12
HFM1A2PYH4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
HFM1A2PYH4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
HFM1A2PYH4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
HFM1A2PYH4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC34.5■■■■□ 3.11
HFM1A2PYH4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC34.49■■■■□ 3.11
HFM1A2PYH4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
HFM1A2PYH4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC34.49■■■■□ 3.11
HFM1A2PYH4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
HFM1A2PYH4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
HFM1A2PYH4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC34.48■■■■□ 3.11
HFM1A2PYH4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC34.48■■■■□ 3.11
HFM1A2PYH4 AL512631.2-201ENST00000604634 923 ntBASIC34.48■■■■□ 3.11
HFM1A2PYH4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC34.48■■■■□ 3.11
HFM1A2PYH4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC34.48■■■■□ 3.11
HFM1A2PYH4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC34.48■■■■□ 3.11
HFM1A2PYH4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC34.48■■■■□ 3.11
HFM1A2PYH4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
HFM1A2PYH4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
HFM1A2PYH4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
HFM1A2PYH4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
HFM1A2PYH4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC34.47■■■■□ 3.11
HFM1A2PYH4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
HFM1A2PYH4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
HFM1A2PYH4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC34.47■■■■□ 3.11
HFM1A2PYH4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC34.47■■■■□ 3.11
HFM1A2PYH4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
HFM1A2PYH4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC34.47■■■■□ 3.11
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms