Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRBV11-1A0A0K0K1C0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRBV11-1A0A0K0K1C0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRBV11-1A0A0K0K1C0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.46■■□□□ 1.03
TRBV11-1A0A0K0K1C0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRBV11-1A0A0K0K1C0 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.45■■□□□ 1.02
TRBV11-1A0A0K0K1C0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRBV11-1A0A0K0K1C0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRBV11-1A0A0K0K1C0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.44■■□□□ 1.02
TRBV11-1A0A0K0K1C0 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.44■■□□□ 1.02
TRBV11-1A0A0K0K1C0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRBV11-1A0A0K0K1C0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRBV11-1A0A0K0K1C0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.44■■□□□ 1.02
TRBV11-1A0A0K0K1C0 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRBV11-1A0A0K0K1C0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRBV11-1A0A0K0K1C0 AC142381.3-201ENST00000568208 1670 ntBASIC21.44■■□□□ 1.02
TRBV11-1A0A0K0K1C0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRBV11-1A0A0K0K1C0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRBV11-1A0A0K0K1C0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRBV11-1A0A0K0K1C0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRBV11-1A0A0K0K1C0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.43■■□□□ 1.02
TRBV11-1A0A0K0K1C0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.43■■□□□ 1.02
TRBV11-1A0A0K0K1C0 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRBV11-1A0A0K0K1C0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
TRBV11-1A0A0K0K1C0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRBV11-1A0A0K0K1C0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.42■■□□□ 1.02
TRBV11-1A0A0K0K1C0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.42■■□□□ 1.02
TRBV11-1A0A0K0K1C0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TRBV11-1A0A0K0K1C0 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.42■■□□□ 1.02
TRBV11-1A0A0K0K1C0 HLA-L-211ENST00000482052 1765 ntBASIC21.42■■□□□ 1.02
TRBV11-1A0A0K0K1C0 AP003733.4-201ENST00000623785 1697 ntBASIC21.42■■□□□ 1.02
TRBV11-1A0A0K0K1C0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.42■■□□□ 1.02
TRBV11-1A0A0K0K1C0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.42■■□□□ 1.02
TRBV11-1A0A0K0K1C0 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRBV11-1A0A0K0K1C0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
TRBV11-1A0A0K0K1C0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRBV11-1A0A0K0K1C0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.41■■□□□ 1.02
TRBV11-1A0A0K0K1C0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRBV11-1A0A0K0K1C0 AC004448.1-201ENST00000458332 883 ntBASIC21.41■■□□□ 1.02
TRBV11-1A0A0K0K1C0 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRBV11-1A0A0K0K1C0 AC138932.3-201ENST00000567634 1902 ntBASIC21.41■■□□□ 1.02
TRBV11-1A0A0K0K1C0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRBV11-1A0A0K0K1C0 AC131274.2-201ENST00000580697 1507 ntBASIC21.4■■□□□ 1.02
TRBV11-1A0A0K0K1C0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRBV11-1A0A0K0K1C0 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRBV11-1A0A0K0K1C0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRBV11-1A0A0K0K1C0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRBV11-1A0A0K0K1C0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRBV11-1A0A0K0K1C0 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.4■■□□□ 1.02
TRBV11-1A0A0K0K1C0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.4■■□□□ 1.02
TRBV11-1A0A0K0K1C0 MIR6724-1-201ENST00000616420 92 ntBASIC21.4■■□□□ 1.02
TRBV11-1A0A0K0K1C0 MIR6724-2-201ENST00000616483 92 ntBASIC21.4■■□□□ 1.02
TRBV11-1A0A0K0K1C0 MIR6724-4-201ENST00000617390 92 ntBASIC21.4■■□□□ 1.02
TRBV11-1A0A0K0K1C0 MIR6724-3-201ENST00000622482 92 ntBASIC21.4■■□□□ 1.02
TRBV11-1A0A0K0K1C0 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRBV11-1A0A0K0K1C0 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRBV11-1A0A0K0K1C0 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
TRBV11-1A0A0K0K1C0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.39■■□□□ 1.02
TRBV11-1A0A0K0K1C0 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRBV11-1A0A0K0K1C0 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.39■■□□□ 1.02
TRBV11-1A0A0K0K1C0 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
TRBV11-1A0A0K0K1C0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
TRBV11-1A0A0K0K1C0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.39■■□□□ 1.02
TRBV11-1A0A0K0K1C0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.39■■□□□ 1.01
TRBV11-1A0A0K0K1C0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.39■■□□□ 1.01
TRBV11-1A0A0K0K1C0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.39■■□□□ 1.01
TRBV11-1A0A0K0K1C0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.39■■□□□ 1.01
TRBV11-1A0A0K0K1C0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRBV11-1A0A0K0K1C0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.39■■□□□ 1.01
TRBV11-1A0A0K0K1C0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRBV11-1A0A0K0K1C0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.38■■□□□ 1.01
TRBV11-1A0A0K0K1C0 AL022069.1-201ENST00000568025 1636 ntBASIC21.38■■□□□ 1.01
TRBV11-1A0A0K0K1C0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRBV11-1A0A0K0K1C0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRBV11-1A0A0K0K1C0 MIR6722-201ENST00000617286 78 ntBASIC21.38■■□□□ 1.01
TRBV11-1A0A0K0K1C0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
TRBV11-1A0A0K0K1C0 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
TRBV11-1A0A0K0K1C0 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRBV11-1A0A0K0K1C0 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRBV11-1A0A0K0K1C0 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRBV11-1A0A0K0K1C0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRBV11-1A0A0K0K1C0 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRBV11-1A0A0K0K1C0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRBV11-1A0A0K0K1C0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.37■■□□□ 1.01
TRBV11-1A0A0K0K1C0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
TRBV11-1A0A0K0K1C0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRBV11-1A0A0K0K1C0 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRBV11-1A0A0K0K1C0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRBV11-1A0A0K0K1C0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.36■■□□□ 1.01
TRBV11-1A0A0K0K1C0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.36■■□□□ 1.01
TRBV11-1A0A0K0K1C0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.36■■□□□ 1.01
TRBV11-1A0A0K0K1C0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRBV11-1A0A0K0K1C0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
TRBV11-1A0A0K0K1C0 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRBV11-1A0A0K0K1C0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRBV11-1A0A0K0K1C0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRBV11-1A0A0K0K1C0 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRBV11-1A0A0K0K1C0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
TRBV11-1A0A0K0K1C0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRBV11-1A0A0K0K1C0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms