Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV12-1A0A0B4J245 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV12-1A0A0B4J245 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
TRAV12-1A0A0B4J245 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV12-1A0A0B4J245 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV12-1A0A0B4J245 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV12-1A0A0B4J245 DUSP8P3-201ENST00000399571 1760 ntBASIC16.23■□□□□ 0.19
TRAV12-1A0A0B4J245 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV12-1A0A0B4J245 HLA-L-211ENST00000482052 1765 ntBASIC16.23■□□□□ 0.19
TRAV12-1A0A0B4J245 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV12-1A0A0B4J245 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV12-1A0A0B4J245 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TRAV12-1A0A0B4J245 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV12-1A0A0B4J245 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV12-1A0A0B4J245 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV12-1A0A0B4J245 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV12-1A0A0B4J245 FOXO3B-201ENST00000395675 1928 ntBASIC16.22■□□□□ 0.19
TRAV12-1A0A0B4J245 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TRAV12-1A0A0B4J245 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV12-1A0A0B4J245 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TRAV12-1A0A0B4J245 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV12-1A0A0B4J245 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV12-1A0A0B4J245 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV12-1A0A0B4J245 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV12-1A0A0B4J245 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TRAV12-1A0A0B4J245 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV12-1A0A0B4J245 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV12-1A0A0B4J245 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAV12-1A0A0B4J245 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV12-1A0A0B4J245 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV12-1A0A0B4J245 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV12-1A0A0B4J245 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC16.21■□□□□ 0.18
TRAV12-1A0A0B4J245 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV12-1A0A0B4J245 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
TRAV12-1A0A0B4J245 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
TRAV12-1A0A0B4J245 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV12-1A0A0B4J245 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
TRAV12-1A0A0B4J245 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV12-1A0A0B4J245 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV12-1A0A0B4J245 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV12-1A0A0B4J245 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV12-1A0A0B4J245 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV12-1A0A0B4J245 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAV12-1A0A0B4J245 ANOS2P-203ENST00000472227 1816 ntBASIC16.2■□□□□ 0.18
TRAV12-1A0A0B4J245 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV12-1A0A0B4J245 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV12-1A0A0B4J245 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV12-1A0A0B4J245 AC136428.2-201ENST00000563187 214 ntBASIC16.2■□□□□ 0.18
TRAV12-1A0A0B4J245 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV12-1A0A0B4J245 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV12-1A0A0B4J245 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV12-1A0A0B4J245 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV12-1A0A0B4J245 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV12-1A0A0B4J245 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV12-1A0A0B4J245 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV12-1A0A0B4J245 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC16.19■□□□□ 0.18
TRAV12-1A0A0B4J245 AC007375.3-201ENST00000600936 2314 ntBASIC16.19■□□□□ 0.18
TRAV12-1A0A0B4J245 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
TRAV12-1A0A0B4J245 AC092068.2-201ENST00000590491 1708 ntBASIC16.19■□□□□ 0.18
TRAV12-1A0A0B4J245 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV12-1A0A0B4J245 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV12-1A0A0B4J245 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV12-1A0A0B4J245 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV12-1A0A0B4J245 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV12-1A0A0B4J245 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV12-1A0A0B4J245 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV12-1A0A0B4J245 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV12-1A0A0B4J245 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV12-1A0A0B4J245 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV12-1A0A0B4J245 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV12-1A0A0B4J245 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV12-1A0A0B4J245 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAV12-1A0A0B4J245 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV12-1A0A0B4J245 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV12-1A0A0B4J245 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV12-1A0A0B4J245 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
TRAV12-1A0A0B4J245 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV12-1A0A0B4J245 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAV12-1A0A0B4J245 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV12-1A0A0B4J245 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAV12-1A0A0B4J245 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TRAV12-1A0A0B4J245 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV12-1A0A0B4J245 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV12-1A0A0B4J245 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV12-1A0A0B4J245 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV12-1A0A0B4J245 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRAV12-1A0A0B4J245 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAV12-1A0A0B4J245 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAV12-1A0A0B4J245 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV12-1A0A0B4J245 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
TRAV12-1A0A0B4J245 CIB2-204ENST00000557846 934 ntTSL 3 BASIC16.16■□□□□ 0.18
TRAV12-1A0A0B4J245 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV12-1A0A0B4J245 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRAV12-1A0A0B4J245 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV12-1A0A0B4J245 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV12-1A0A0B4J245 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV12-1A0A0B4J245 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TRAV12-1A0A0B4J245 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV12-1A0A0B4J245 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV12-1A0A0B4J245 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms