Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV18A0A075B6X5 PKD1P6-201ENST00000343738 4769 ntBASIC19.81■□□□□ 0.76
TRAV18A0A075B6X5 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TRAV18A0A075B6X5 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV18A0A075B6X5 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV18A0A075B6X5 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV18A0A075B6X5 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.8■□□□□ 0.76
TRAV18A0A075B6X5 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.8■□□□□ 0.76
TRAV18A0A075B6X5 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV18A0A075B6X5 MIR3960-201ENST00000583311 91 ntBASIC19.8■□□□□ 0.76
TRAV18A0A075B6X5 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.8■□□□□ 0.76
TRAV18A0A075B6X5 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.8■□□□□ 0.76
TRAV18A0A075B6X5 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV18A0A075B6X5 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV18A0A075B6X5 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV18A0A075B6X5 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV18A0A075B6X5 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV18A0A075B6X5 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV18A0A075B6X5 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV18A0A075B6X5 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV18A0A075B6X5 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV18A0A075B6X5 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.79■□□□□ 0.76
TRAV18A0A075B6X5 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.79■□□□□ 0.76
TRAV18A0A075B6X5 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAV18A0A075B6X5 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV18A0A075B6X5 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.78■□□□□ 0.76
TRAV18A0A075B6X5 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV18A0A075B6X5 AC233723.2-201ENST00000623798 2106 ntBASIC19.78■□□□□ 0.76
TRAV18A0A075B6X5 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV18A0A075B6X5 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAV18A0A075B6X5 AC025884.2-201ENST00000553429 711 ntBASIC19.78■□□□□ 0.76
TRAV18A0A075B6X5 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.78■□□□□ 0.76
TRAV18A0A075B6X5 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.78■□□□□ 0.76
TRAV18A0A075B6X5 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV18A0A075B6X5 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV18A0A075B6X5 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV18A0A075B6X5 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV18A0A075B6X5 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.78■□□□□ 0.76
TRAV18A0A075B6X5 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV18A0A075B6X5 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
TRAV18A0A075B6X5 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV18A0A075B6X5 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV18A0A075B6X5 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV18A0A075B6X5 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV18A0A075B6X5 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV18A0A075B6X5 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV18A0A075B6X5 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV18A0A075B6X5 AL157400.5-201ENST00000507624 621 ntBASIC19.76■□□□□ 0.75
TRAV18A0A075B6X5 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV18A0A075B6X5 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
TRAV18A0A075B6X5 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
TRAV18A0A075B6X5 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV18A0A075B6X5 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TRAV18A0A075B6X5 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV18A0A075B6X5 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.75■□□□□ 0.75
TRAV18A0A075B6X5 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV18A0A075B6X5 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV18A0A075B6X5 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV18A0A075B6X5 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV18A0A075B6X5 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV18A0A075B6X5 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TRAV18A0A075B6X5 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TRAV18A0A075B6X5 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV18A0A075B6X5 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
TRAV18A0A075B6X5 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TRAV18A0A075B6X5 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV18A0A075B6X5 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
TRAV18A0A075B6X5 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV18A0A075B6X5 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV18A0A075B6X5 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV18A0A075B6X5 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV18A0A075B6X5 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV18A0A075B6X5 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV18A0A075B6X5 ZNRF2P2-203ENST00000454624 420 ntBASIC19.74■□□□□ 0.75
TRAV18A0A075B6X5 CR559946.2-201ENST00000623684 991 ntBASIC19.74■□□□□ 0.75
TRAV18A0A075B6X5 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.74■□□□□ 0.75
TRAV18A0A075B6X5 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV18A0A075B6X5 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV18A0A075B6X5 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.74■□□□□ 0.75
TRAV18A0A075B6X5 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV18A0A075B6X5 EP400NL-214ENST00000641289 2402 ntBASIC19.74■□□□□ 0.75
TRAV18A0A075B6X5 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV18A0A075B6X5 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TRAV18A0A075B6X5 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV18A0A075B6X5 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV18A0A075B6X5 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV18A0A075B6X5 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV18A0A075B6X5 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV18A0A075B6X5 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV18A0A075B6X5 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV18A0A075B6X5 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV18A0A075B6X5 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.73■□□□□ 0.75
TRAV18A0A075B6X5 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV18A0A075B6X5 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.73■□□□□ 0.75
TRAV18A0A075B6X5 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV18A0A075B6X5 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV18A0A075B6X5 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV18A0A075B6X5 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TRAV18A0A075B6X5 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV18A0A075B6X5 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms