Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DDX49Q9Y6V7 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
DDX49Q9Y6V7 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.52■□□□□ 0.56
DDX49Q9Y6V7 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.52■□□□□ 0.56
DDX49Q9Y6V7 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.52■□□□□ 0.56
DDX49Q9Y6V7 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
DDX49Q9Y6V7 COX5BP8-201ENST00000416911 349 ntBASIC18.52■□□□□ 0.56
DDX49Q9Y6V7 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.52■□□□□ 0.56
DDX49Q9Y6V7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.52■□□□□ 0.56
DDX49Q9Y6V7 AC245100.5-201ENST00000452108 331 ntBASIC18.52■□□□□ 0.56
DDX49Q9Y6V7 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
DDX49Q9Y6V7 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.52■□□□□ 0.56
DDX49Q9Y6V7 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.52■□□□□ 0.56
DDX49Q9Y6V7 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.52■□□□□ 0.56
DDX49Q9Y6V7 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
DDX49Q9Y6V7 AC126365.1-201ENST00000578585 1514 ntBASIC18.52■□□□□ 0.56
DDX49Q9Y6V7 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
DDX49Q9Y6V7 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
DDX49Q9Y6V7 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
DDX49Q9Y6V7 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.52■□□□□ 0.55
DDX49Q9Y6V7 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
DDX49Q9Y6V7 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
DDX49Q9Y6V7 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
DDX49Q9Y6V7 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
DDX49Q9Y6V7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
DDX49Q9Y6V7 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
DDX49Q9Y6V7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
DDX49Q9Y6V7 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 AC134407.2-201ENST00000625089 1978 ntBASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 MROH4P-201ENST00000431302 1578 ntBASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 GK-202ENST00000378941 458 ntTSL 3 BASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 R3HDM2P2-201ENST00000401880 2116 ntBASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 NME2P1-201ENST00000426182 414 ntBASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 AJ011931.1-201ENST00000618749 2492 ntBASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
DDX49Q9Y6V7 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 AL589987.1-201ENST00000453380 819 ntBASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 WASH4P-201ENST00000564273 1246 ntBASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 CHCHD2P3-201ENST00000603038 451 ntBASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 AC005840.4-201ENST00000541242 2494 ntBASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDX49Q9Y6V7 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms