Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 AC087762.1-201ENST00000559755 643 ntTSL 3 BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHB13Q9Y5F0 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.08■□□□□ 0.33
PCDHB13Q9Y5F0 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHB13Q9Y5F0 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.08■□□□□ 0.33
PCDHB13Q9Y5F0 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHB13Q9Y5F0 FCAR-203ENST00000355524 1483 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB13Q9Y5F0 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB13Q9Y5F0 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.08■□□□□ 0.32
PCDHB13Q9Y5F0 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB13Q9Y5F0 AC236430.1-201ENST00000402231 743 ntBASIC17.08■□□□□ 0.32
PCDHB13Q9Y5F0 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHB13Q9Y5F0 MTND1P26-201ENST00000440488 538 ntBASIC17.08■□□□□ 0.32
PCDHB13Q9Y5F0 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB13Q9Y5F0 EAF2-202ENST00000451944 960 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHB13Q9Y5F0 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB13Q9Y5F0 AC104596.2-201ENST00000512793 793 ntBASIC17.08■□□□□ 0.32
PCDHB13Q9Y5F0 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDHB13Q9Y5F0 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.08■□□□□ 0.32
PCDHB13Q9Y5F0 ATOX1-206ENST00000522710 591 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PCDHB13Q9Y5F0 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
PCDHB13Q9Y5F0 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDHB13Q9Y5F0 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PCDHB13Q9Y5F0 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PCDHB13Q9Y5F0 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHB13Q9Y5F0 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PCDHB13Q9Y5F0 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PCDHB13Q9Y5F0 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB13Q9Y5F0 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB13Q9Y5F0 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB13Q9Y5F0 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB13Q9Y5F0 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB13Q9Y5F0 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDHB13Q9Y5F0 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHB13Q9Y5F0 MST1L-201ENST00000442552 2185 ntBASIC17.08■□□□□ 0.32
PCDHB13Q9Y5F0 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB13Q9Y5F0 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 ELL2P2-201ENST00000515135 694 ntBASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 AL132655.2-201ENST00000596276 594 ntBASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB13Q9Y5F0 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHB13Q9Y5F0 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PCDHB13Q9Y5F0 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PCDHB13Q9Y5F0 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms