Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 RPL13AP23-201ENST00000480739 586 ntBASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 KRT8P48-201ENST00000515599 1220 ntBASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 SLC25A39P2-201ENST00000537614 270 ntBASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 AC015910.1-201ENST00000579400 975 ntBASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 AC138969.3-201ENST00000546612 1459 ntBASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 AC138932.2-201ENST00000548268 1459 ntBASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 AC126755.4-201ENST00000549796 1459 ntBASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 UXT-AS1-201ENST00000590504 1525 ntBASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 AL137784.3-201ENST00000623858 2288 ntBASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 AL450487.1-201ENST00000426799 995 ntBASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 HIST3H2BA-201ENST00000436555 524 ntBASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 TARDBPP1-201ENST00000442013 1203 ntBASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 GATB-205ENST00000508611 605 ntTSL 2 BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
UBE2D4Q9Y2X8 AC007787.1-201ENST00000588095 1583 ntBASIC10.71□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms