Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 AC004066.1-201ENST00000502488 802 ntBASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 AC133539.2-201ENST00000604757 467 ntBASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 AC093525.8-201ENST00000624099 1342 ntBASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 KRT8P22-201ENST00000562317 1415 ntBASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.54□□□□□ -0.08
KCMF1Q9P0J7 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 FAM45BP-202ENST00000592932 1624 ntBASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
KCMF1Q9P0J7 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms