Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 IQSEC3P1-201ENST00000538799 536 ntBASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 MIR4750-201ENST00000584564 56 ntBASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 RN7SL555P-201ENST00000584742 339 ntBASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 AL360270.3-201ENST00000609118 1348 ntBASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 AL355334.1-201ENST00000417713 215 ntBASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 AC104784.1-201ENST00000473096 294 ntBASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 AC005740.2-201ENST00000511085 419 ntBASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 RN7SL713P-201ENST00000582127 302 ntBASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 AC073413.1-201ENST00000603927 732 ntBASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 REXO1L4P-201ENST00000605109 1937 ntBASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 MST1L-201ENST00000442552 2185 ntBASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PDLIM7Q9NR12 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 LRRC59-203ENST00000576448 1531 ntBASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM7Q9NR12 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms