Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 AJ011931.1-201ENST00000618749 2492 ntBASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 TSPY16P-201ENST00000449843 468 ntBASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 TIMM17BP1-201ENST00000545713 516 ntBASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 AC092337.1-201ENST00000568699 1129 ntBASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 AL390955.2-201ENST00000603032 514 ntBASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 AC100757.3-201ENST00000622361 1406 ntBASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 REXO1L4P-201ENST00000605109 1937 ntBASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 ACE3P-201ENST00000423435 1973 ntBASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
NEUROD4Q9HD90 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 AP000845.1-201ENST00000581677 2131 ntBASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 AC236430.1-201ENST00000402231 743 ntBASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 AC092580.3-201ENST00000430932 139 ntBASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 AC002472.2-201ENST00000442739 958 ntBASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 AC044860.1-202ENST00000559481 777 ntBASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 RN7SL602P-201ENST00000578326 324 ntBASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NEUROD4Q9HD90 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.52□□□□□ -0.08
NEUROD4Q9HD90 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.52□□□□□ -0.08
NEUROD4Q9HD90 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NEUROD4Q9HD90 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
NEUROD4Q9HD90 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NEUROD4Q9HD90 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NEUROD4Q9HD90 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms