Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 COX5BP1-201ENST00000507622 393 ntBASIC16.45■□□□□ 0.22
NXF3Q9H4D5 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.45■□□□□ 0.22
NXF3Q9H4D5 FAM8A2P-201ENST00000528813 1142 ntBASIC16.45■□□□□ 0.22
NXF3Q9H4D5 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.45■□□□□ 0.22
NXF3Q9H4D5 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
NXF3Q9H4D5 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.45■□□□□ 0.22
NXF3Q9H4D5 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.45■□□□□ 0.22
NXF3Q9H4D5 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NXF3Q9H4D5 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.45■□□□□ 0.22
NXF3Q9H4D5 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.45■□□□□ 0.22
NXF3Q9H4D5 AC073413.1-201ENST00000603927 732 ntBASIC16.45■□□□□ 0.22
NXF3Q9H4D5 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NXF3Q9H4D5 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NXF3Q9H4D5 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.45■□□□□ 0.22
NXF3Q9H4D5 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NXF3Q9H4D5 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NXF3Q9H4D5 AP000845.1-201ENST00000581677 2131 ntBASIC16.45■□□□□ 0.22
NXF3Q9H4D5 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.45■□□□□ 0.22
NXF3Q9H4D5 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.45■□□□□ 0.22
NXF3Q9H4D5 TMBIM7P-203ENST00000641617 1718 ntBASIC16.45■□□□□ 0.22
NXF3Q9H4D5 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.45■□□□□ 0.22
NXF3Q9H4D5 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NXF3Q9H4D5 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 KRT8P44-201ENST00000441609 1350 ntBASIC16.44■□□□□ 0.22
NXF3Q9H4D5 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 MTX1P1-201ENST00000440904 838 ntBASIC16.44■□□□□ 0.22
NXF3Q9H4D5 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 AC099548.2-209ENST00000480264 625 ntBASIC16.44■□□□□ 0.22
NXF3Q9H4D5 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 RPSAP36-202ENST00000494591 1261 ntBASIC16.44■□□□□ 0.22
NXF3Q9H4D5 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 AC106820.3-201ENST00000561653 397 ntBASIC16.44■□□□□ 0.22
NXF3Q9H4D5 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 AC243960.2-201ENST00000600996 747 ntBASIC16.44■□□□□ 0.22
NXF3Q9H4D5 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 AC005695.3-201ENST00000614522 232 ntBASIC16.44■□□□□ 0.22
NXF3Q9H4D5 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 AL023775.1-201ENST00000454907 1746 ntBASIC16.44■□□□□ 0.22
NXF3Q9H4D5 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.44■□□□□ 0.22
NXF3Q9H4D5 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
NXF3Q9H4D5 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NXF3Q9H4D5 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NXF3Q9H4D5 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NXF3Q9H4D5 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
NXF3Q9H4D5 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NXF3Q9H4D5 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
NXF3Q9H4D5 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NXF3Q9H4D5 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.43■□□□□ 0.22
NXF3Q9H4D5 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NXF3Q9H4D5 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NXF3Q9H4D5 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NXF3Q9H4D5 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NXF3Q9H4D5 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
NXF3Q9H4D5 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
NXF3Q9H4D5 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NXF3Q9H4D5 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NXF3Q9H4D5 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.43■□□□□ 0.22
NXF3Q9H4D5 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
NXF3Q9H4D5 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NXF3Q9H4D5 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NXF3Q9H4D5 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NXF3Q9H4D5 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NXF3Q9H4D5 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.43■□□□□ 0.22
NXF3Q9H4D5 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NXF3Q9H4D5 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.43■□□□□ 0.22
NXF3Q9H4D5 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms