Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.48■□□□□ 0.23
SNX27Q96L92 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.48■□□□□ 0.23
SNX27Q96L92 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.48■□□□□ 0.23
SNX27Q96L92 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.48■□□□□ 0.23
SNX27Q96L92 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.48■□□□□ 0.23
SNX27Q96L92 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.48■□□□□ 0.23
SNX27Q96L92 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.48■□□□□ 0.23
SNX27Q96L92 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.48■□□□□ 0.23
SNX27Q96L92 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNX27Q96L92 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.48■□□□□ 0.23
SNX27Q96L92 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.48■□□□□ 0.23
SNX27Q96L92 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SNX27Q96L92 AC008687.7-202ENST00000637404 953 ntBASIC16.48■□□□□ 0.23
SNX27Q96L92 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SNX27Q96L92 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SNX27Q96L92 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.48■□□□□ 0.23
SNX27Q96L92 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNX27Q96L92 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SNX27Q96L92 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.48■□□□□ 0.23
SNX27Q96L92 AC126365.1-201ENST00000578585 1514 ntBASIC16.48■□□□□ 0.23
SNX27Q96L92 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SNX27Q96L92 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SNX27Q96L92 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SNX27Q96L92 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNX27Q96L92 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SNX27Q96L92 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNX27Q96L92 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SNX27Q96L92 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SNX27Q96L92 AC012508.2-201ENST00000567613 1472 ntBASIC16.48■□□□□ 0.23
SNX27Q96L92 AC023024.2-201ENST00000623561 1993 ntBASIC16.47■□□□□ 0.23
SNX27Q96L92 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX27Q96L92 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SNX27Q96L92 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.47■□□□□ 0.23
SNX27Q96L92 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SNX27Q96L92 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.47■□□□□ 0.23
SNX27Q96L92 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SNX27Q96L92 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SNX27Q96L92 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SNX27Q96L92 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SNX27Q96L92 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX27Q96L92 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX27Q96L92 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX27Q96L92 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX27Q96L92 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX27Q96L92 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.47■□□□□ 0.23
SNX27Q96L92 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SNX27Q96L92 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SNX27Q96L92 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.47■□□□□ 0.23
SNX27Q96L92 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX27Q96L92 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SNX27Q96L92 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.47■□□□□ 0.23
SNX27Q96L92 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.47■□□□□ 0.23
SNX27Q96L92 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX27Q96L92 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.47■□□□□ 0.23
SNX27Q96L92 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX27Q96L92 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.47■□□□□ 0.23
SNX27Q96L92 DUX4L47-201ENST00000566374 394 ntBASIC16.47■□□□□ 0.23
SNX27Q96L92 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.47■□□□□ 0.23
SNX27Q96L92 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.47■□□□□ 0.23
SNX27Q96L92 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.47■□□□□ 0.23
SNX27Q96L92 ENPP7P14-201ENST00000621765 1040 ntBASIC16.47■□□□□ 0.23
SNX27Q96L92 AL603764.1-201ENST00000636452 321 ntBASIC16.47■□□□□ 0.23
SNX27Q96L92 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX27Q96L92 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX27Q96L92 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SNX27Q96L92 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SNX27Q96L92 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX27Q96L92 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX27Q96L92 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX27Q96L92 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.47■□□□□ 0.23
SNX27Q96L92 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX27Q96L92 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX27Q96L92 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SNX27Q96L92 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX27Q96L92 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SNX27Q96L92 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX27Q96L92 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.46■□□□□ 0.23
SNX27Q96L92 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.46■□□□□ 0.23
SNX27Q96L92 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SNX27Q96L92 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX27Q96L92 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SNX27Q96L92 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SNX27Q96L92 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SNX27Q96L92 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.46■□□□□ 0.23
SNX27Q96L92 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX27Q96L92 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SNX27Q96L92 AL359258.3-201ENST00000622910 2331 ntBASIC16.46■□□□□ 0.23
SNX27Q96L92 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX27Q96L92 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SNX27Q96L92 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.46■□□□□ 0.23
SNX27Q96L92 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SNX27Q96L92 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SNX27Q96L92 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX27Q96L92 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SNX27Q96L92 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.46■□□□□ 0.23
SNX27Q96L92 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX27Q96L92 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX27Q96L92 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.46■□□□□ 0.23
SNX27Q96L92 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SNX27Q96L92 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms