Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.87□□□□□ -0.03
RNF31Q96EP0 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
RNF31Q96EP0 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.87□□□□□ -0.03
RNF31Q96EP0 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF31Q96EP0 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
RNF31Q96EP0 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF31Q96EP0 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF31Q96EP0 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RNF31Q96EP0 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF31Q96EP0 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF31Q96EP0 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF31Q96EP0 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF31Q96EP0 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.87□□□□□ -0.03
RNF31Q96EP0 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF31Q96EP0 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF31Q96EP0 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF31Q96EP0 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.87□□□□□ -0.03
RNF31Q96EP0 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.87□□□□□ -0.03
RNF31Q96EP0 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF31Q96EP0 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF31Q96EP0 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.86□□□□□ -0.03
RNF31Q96EP0 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF31Q96EP0 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF31Q96EP0 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF31Q96EP0 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF31Q96EP0 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF31Q96EP0 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.86□□□□□ -0.03
RNF31Q96EP0 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.86□□□□□ -0.03
RNF31Q96EP0 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF31Q96EP0 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF31Q96EP0 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF31Q96EP0 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.86□□□□□ -0.03
RNF31Q96EP0 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
RNF31Q96EP0 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF31Q96EP0 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
RNF31Q96EP0 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF31Q96EP0 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.86□□□□□ -0.03
RNF31Q96EP0 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RNF31Q96EP0 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF31Q96EP0 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.86□□□□□ -0.03
RNF31Q96EP0 KLF2P4-201ENST00000451959 1225 ntBASIC14.86□□□□□ -0.03
RNF31Q96EP0 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF31Q96EP0 AP001889.1-201ENST00000525414 633 ntBASIC14.86□□□□□ -0.03
RNF31Q96EP0 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.86□□□□□ -0.03
RNF31Q96EP0 RN7SL219P-201ENST00000582872 296 ntBASIC14.86□□□□□ -0.03
RNF31Q96EP0 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.86□□□□□ -0.03
RNF31Q96EP0 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.86□□□□□ -0.03
RNF31Q96EP0 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RNF31Q96EP0 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF31Q96EP0 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.86□□□□□ -0.03
RNF31Q96EP0 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF31Q96EP0 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF31Q96EP0 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF31Q96EP0 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF31Q96EP0 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF31Q96EP0 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF31Q96EP0 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF31Q96EP0 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RNF31Q96EP0 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
RNF31Q96EP0 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF31Q96EP0 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RNF31Q96EP0 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF31Q96EP0 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF31Q96EP0 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF31Q96EP0 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.85□□□□□ -0.03
RNF31Q96EP0 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.85□□□□□ -0.03
RNF31Q96EP0 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.85□□□□□ -0.03
RNF31Q96EP0 MTHFR-217ENST00000641820 1569 ntBASIC14.85□□□□□ -0.03
RNF31Q96EP0 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RNF31Q96EP0 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF31Q96EP0 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF31Q96EP0 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF31Q96EP0 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF31Q96EP0 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF31Q96EP0 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF31Q96EP0 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RNF31Q96EP0 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF31Q96EP0 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF31Q96EP0 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.85□□□□□ -0.03
RNF31Q96EP0 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF31Q96EP0 KRT43P-201ENST00000434019 910 ntBASIC14.85□□□□□ -0.03
RNF31Q96EP0 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.85□□□□□ -0.03
RNF31Q96EP0 AC093433.1-201ENST00000458048 571 ntBASIC14.85□□□□□ -0.03
RNF31Q96EP0 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
RNF31Q96EP0 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
RNF31Q96EP0 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF31Q96EP0 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.85□□□□□ -0.03
RNF31Q96EP0 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.85□□□□□ -0.03
RNF31Q96EP0 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF31Q96EP0 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RNF31Q96EP0 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF31Q96EP0 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RNF31Q96EP0 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RNF31Q96EP0 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF31Q96EP0 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF31Q96EP0 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF31Q96EP0 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF31Q96EP0 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF31Q96EP0 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF31Q96EP0 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms