Protein–RNA interactions for Protein: Q96AE4

FUBP1, Far upstream element-binding protein 1, humanhuman

Known RBP Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP1Q96AE4 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
FUBP1Q96AE4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
FUBP1Q96AE4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
FUBP1Q96AE4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FUBP1Q96AE4 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
FUBP1Q96AE4 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.32■□□□□ 0.04
FUBP1Q96AE4 MIR658-201ENST00000385210 100 ntBASIC15.32■□□□□ 0.04
FUBP1Q96AE4 BAATP1-201ENST00000412284 1225 ntBASIC15.32■□□□□ 0.04
FUBP1Q96AE4 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
FUBP1Q96AE4 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
FUBP1Q96AE4 KRT43P-201ENST00000434019 910 ntBASIC15.32■□□□□ 0.04
FUBP1Q96AE4 BCRP2-202ENST00000447763 634 ntBASIC15.32■□□□□ 0.04
FUBP1Q96AE4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FUBP1Q96AE4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FUBP1Q96AE4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
FUBP1Q96AE4 BCRP6-201ENST00000510112 632 ntBASIC15.32■□□□□ 0.04
FUBP1Q96AE4 BCRP7-201ENST00000511549 544 ntBASIC15.32■□□□□ 0.04
FUBP1Q96AE4 AP001582.1-201ENST00000525856 295 ntBASIC15.32■□□□□ 0.04
FUBP1Q96AE4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FUBP1Q96AE4 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FUBP1Q96AE4 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.32■□□□□ 0.04
FUBP1Q96AE4 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.32■□□□□ 0.04
FUBP1Q96AE4 MIR6805-201ENST00000615055 62 ntBASIC15.32■□□□□ 0.04
FUBP1Q96AE4 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.32■□□□□ 0.04
FUBP1Q96AE4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.32■□□□□ 0.04
FUBP1Q96AE4 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.32■□□□□ 0.04
FUBP1Q96AE4 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FUBP1Q96AE4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
FUBP1Q96AE4 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
FUBP1Q96AE4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
FUBP1Q96AE4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FUBP1Q96AE4 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FUBP1Q96AE4 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.32■□□□□ 0.04
FUBP1Q96AE4 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
FUBP1Q96AE4 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
FUBP1Q96AE4 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FUBP1Q96AE4 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
FUBP1Q96AE4 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.32■□□□□ 0.04
FUBP1Q96AE4 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
FUBP1Q96AE4 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
FUBP1Q96AE4 AL138799.1-201ENST00000448213 1675 ntBASIC15.32■□□□□ 0.04
FUBP1Q96AE4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 CICP11-201ENST00000434745 2827 ntBASIC15.31■□□□□ 0.04
FUBP1Q96AE4 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 AL359258.3-201ENST00000622910 2331 ntBASIC15.31■□□□□ 0.04
FUBP1Q96AE4 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 AC005229.1-201ENST00000392885 409 ntBASIC15.31■□□□□ 0.04
FUBP1Q96AE4 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 AL022328.1-201ENST00000610050 478 ntBASIC15.31■□□□□ 0.04
FUBP1Q96AE4 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 AC134312.5-201ENST00000568031 1313 ntBASIC15.31■□□□□ 0.04
FUBP1Q96AE4 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.31■□□□□ 0.04
FUBP1Q96AE4 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
FUBP1Q96AE4 CICP24-201ENST00000605464 2705 ntBASIC15.3■□□□□ 0.04
FUBP1Q96AE4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
FUBP1Q96AE4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms