Protein–RNA interactions for Protein: Q8WWF3

SSMEM1, Serine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1Q8WWF3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SSMEM1Q8WWF3 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.8□□□□□ -0.36
SSMEM1Q8WWF3 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSMEM1Q8WWF3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 AP001282.1-201ENST00000531301 1499 ntBASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 ATP5G2P4-201ENST00000442175 420 ntBASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 WASH4P-201ENST00000564273 1246 ntBASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 AC036164.1-201ENST00000570544 333 ntBASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 MIR6752-201ENST00000618442 71 ntBASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 AC134407.2-201ENST00000625089 1978 ntBASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSMEM1Q8WWF3 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 AL589987.1-201ENST00000453380 819 ntBASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 NOP2-220ENST00000545915 630 ntTSL 2 BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 TMEM261P1-201ENST00000604899 340 ntBASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 IGHV3-72-202ENST00000621503 303 ntBASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSMEM1Q8WWF3 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms