Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC008972.2-201ENST00000606587 494 ntBASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 AL662844.4-201ENST00000606367 2838 ntBASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 API5-202ENST00000420461 2009 ntTSL 2 BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 AL672207.1-201ENST00000328462 1570 ntBASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 LTF-203ENST00000426532 2494 ntTSL 2 BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 PPIA-208ENST00000489459 907 ntTSL 2 BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 ABHD17AP9-201ENST00000561925 548 ntBASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 PPIA-210ENST00000620047 827 ntTSL 5 BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 GEMIN8P4-201ENST00000380526 729 ntBASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 LINC02447-202ENST00000501888 2146 ntBASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 OR5BD1P-201ENST00000532527 817 ntBASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 AC007326.1-201ENST00000604539 458 ntBASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 MARK2P16-201ENST00000605714 1723 ntBASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 AC127383.1-201ENST00000444697 1800 ntBASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 TMBIM7P-202ENST00000641474 1516 ntBASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 NKILA-202ENST00000614771 2598 ntBASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 REXO1L2P-201ENST00000425429 2069 ntBASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 RN7SL530P-201ENST00000485097 298 ntBASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 PMEL-214ENST00000550447 901 ntTSL 3 BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 MIR4472-1-201ENST00000584349 80 ntBASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
ALMS1Q8TCU4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC9.97□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms