Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AC024681.1-201ENST00000521917 487 ntBASIC15.73■□□□□ 0.11
SIX5Q8N196 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC15.73■□□□□ 0.11
SIX5Q8N196 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.73■□□□□ 0.11
SIX5Q8N196 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SIX5Q8N196 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC15.73■□□□□ 0.11
SIX5Q8N196 RN7SL574P-201ENST00000581512 297 ntBASIC15.73■□□□□ 0.11
SIX5Q8N196 MIR4750-201ENST00000584564 56 ntBASIC15.73■□□□□ 0.11
SIX5Q8N196 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.73■□□□□ 0.11
SIX5Q8N196 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
SIX5Q8N196 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.73■□□□□ 0.11
SIX5Q8N196 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SIX5Q8N196 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SIX5Q8N196 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.73■□□□□ 0.11
SIX5Q8N196 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SIX5Q8N196 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SIX5Q8N196 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIX5Q8N196 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIX5Q8N196 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SIX5Q8N196 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIX5Q8N196 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIX5Q8N196 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIX5Q8N196 AC008132.1-202ENST00000342005 1389 ntBASIC15.73■□□□□ 0.11
SIX5Q8N196 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIX5Q8N196 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIX5Q8N196 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.73■□□□□ 0.11
SIX5Q8N196 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
SIX5Q8N196 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SIX5Q8N196 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIX5Q8N196 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SIX5Q8N196 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIX5Q8N196 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIX5Q8N196 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIX5Q8N196 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SIX5Q8N196 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.72■□□□□ 0.11
SIX5Q8N196 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
SIX5Q8N196 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIX5Q8N196 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIX5Q8N196 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIX5Q8N196 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
SIX5Q8N196 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC15.72■□□□□ 0.11
SIX5Q8N196 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC15.72■□□□□ 0.11
SIX5Q8N196 AC007274.2-201ENST00000421675 662 ntBASIC15.72■□□□□ 0.11
SIX5Q8N196 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.72■□□□□ 0.11
SIX5Q8N196 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SIX5Q8N196 AC069218.1-201ENST00000435269 762 ntBASIC15.72■□□□□ 0.11
SIX5Q8N196 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SIX5Q8N196 AC011742.3-201ENST00000439053 820 ntBASIC15.72■□□□□ 0.11
SIX5Q8N196 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.72■□□□□ 0.11
SIX5Q8N196 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.72■□□□□ 0.11
SIX5Q8N196 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.72■□□□□ 0.11
SIX5Q8N196 AC022217.1-201ENST00000521069 738 ntBASIC15.72■□□□□ 0.11
SIX5Q8N196 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.72■□□□□ 0.11
SIX5Q8N196 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
SIX5Q8N196 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC15.72■□□□□ 0.11
SIX5Q8N196 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC15.72■□□□□ 0.11
SIX5Q8N196 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIX5Q8N196 AP003419.4-201ENST00000616071 517 ntBASIC15.72■□□□□ 0.11
SIX5Q8N196 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.72■□□□□ 0.11
SIX5Q8N196 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIX5Q8N196 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIX5Q8N196 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
SIX5Q8N196 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIX5Q8N196 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.72■□□□□ 0.11
SIX5Q8N196 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIX5Q8N196 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIX5Q8N196 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIX5Q8N196 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIX5Q8N196 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIX5Q8N196 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIX5Q8N196 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIX5Q8N196 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SIX5Q8N196 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIX5Q8N196 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIX5Q8N196 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SIX5Q8N196 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIX5Q8N196 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SIX5Q8N196 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.71■□□□□ 0.11
SIX5Q8N196 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIX5Q8N196 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIX5Q8N196 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIX5Q8N196 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.71■□□□□ 0.11
SIX5Q8N196 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.71■□□□□ 0.11
SIX5Q8N196 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SIX5Q8N196 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
SIX5Q8N196 AP001094.4-201ENST00000579008 2176 ntBASIC15.71■□□□□ 0.11
SIX5Q8N196 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.11
SIX5Q8N196 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIX5Q8N196 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIX5Q8N196 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIX5Q8N196 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SIX5Q8N196 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SIX5Q8N196 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIX5Q8N196 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.71■□□□□ 0.11
SIX5Q8N196 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SIX5Q8N196 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SIX5Q8N196 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SIX5Q8N196 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SIX5Q8N196 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.71■□□□□ 0.11
SIX5Q8N196 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.71■□□□□ 0.11
SIX5Q8N196 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms