Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 AL391280.1-201ENST00000506969 1062 ntBASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 COX5BP1-201ENST00000507622 393 ntBASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 AGER-214ENST00000538695 487 ntTSL 2 BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 AC073413.1-201ENST00000603927 732 ntBASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
UBE3BQ7Z3V4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
UBE3BQ7Z3V4 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBE3BQ7Z3V4 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
UBE3BQ7Z3V4 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.98■□□□□ 0.63
UBE3BQ7Z3V4 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
UBE3BQ7Z3V4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.98■□□□□ 0.63
UBE3BQ7Z3V4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBE3BQ7Z3V4 PFN1P12-201ENST00000455938 534 ntBASIC18.98■□□□□ 0.63
UBE3BQ7Z3V4 RPSAP36-202ENST00000494591 1261 ntBASIC18.98■□□□□ 0.63
UBE3BQ7Z3V4 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC18.98■□□□□ 0.63
UBE3BQ7Z3V4 FAM8A2P-201ENST00000528813 1142 ntBASIC18.98■□□□□ 0.63
UBE3BQ7Z3V4 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC18.98■□□□□ 0.63
UBE3BQ7Z3V4 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC18.98■□□□□ 0.63
UBE3BQ7Z3V4 AC106820.3-201ENST00000561653 397 ntBASIC18.98■□□□□ 0.63
UBE3BQ7Z3V4 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC18.98■□□□□ 0.63
UBE3BQ7Z3V4 EEF1DP1-201ENST00000585891 896 ntBASIC18.98■□□□□ 0.63
UBE3BQ7Z3V4 CYGB-203ENST00000589145 788 ntTSL 3 BASIC18.98■□□□□ 0.63
UBE3BQ7Z3V4 KLK3-211ENST00000597483 810 ntTSL 2 BASIC18.98■□□□□ 0.63
UBE3BQ7Z3V4 AC138466.3-201ENST00000619983 221 ntBASIC18.98■□□□□ 0.63
UBE3BQ7Z3V4 ABBA01031663.1-201ENST00000635630 790 ntBASIC18.98■□□□□ 0.63
UBE3BQ7Z3V4 ANKRD30BP2-201ENST00000435744 1610 ntBASIC18.98■□□□□ 0.63
UBE3BQ7Z3V4 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
UBE3BQ7Z3V4 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
UBE3BQ7Z3V4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
UBE3BQ7Z3V4 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBE3BQ7Z3V4 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBE3BQ7Z3V4 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
UBE3BQ7Z3V4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBE3BQ7Z3V4 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBE3BQ7Z3V4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBE3BQ7Z3V4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBE3BQ7Z3V4 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.98■□□□□ 0.63
UBE3BQ7Z3V4 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
UBE3BQ7Z3V4 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC18.98■□□□□ 0.63
UBE3BQ7Z3V4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 AL023775.1-201ENST00000454907 1746 ntBASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 AC007969.1-201ENST00000433675 447 ntBASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 PRKN-211ENST00000615065 261 ntTSL 5 BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBE3BQ7Z3V4 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms