Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 HYMAI-201ENST00000635591 3347 ntBASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 AGER-203ENST00000375065 665 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 AL022328.3-201ENST00000607943 679 ntBASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 AL354989.2-201ENST00000435838 1540 ntBASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 NORAD-201ENST00000565493 5339 ntBASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC62Q6P9F0 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 BCYRN1-201ENST00000418539 200 ntBASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 HLA-K-203ENST00000430151 1046 ntBASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 MTX1P1-201ENST00000440904 838 ntBASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 AC245100.3-201ENST00000441281 285 ntBASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 AC022616.1-201ENST00000518688 554 ntBASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 AL513523.2-202ENST00000427283 2040 ntBASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC62Q6P9F0 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CCDC62Q6P9F0 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CCDC62Q6P9F0 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC62Q6P9F0 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC62Q6P9F0 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.17■□□□□ 0.34
CCDC62Q6P9F0 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC62Q6P9F0 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC62Q6P9F0 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CCDC62Q6P9F0 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
CCDC62Q6P9F0 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC62Q6P9F0 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC62Q6P9F0 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms