Protein–RNA interactions for Protein: Q15032

R3HDM1, R3H domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1Q15032 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.83■□□□□ 0.61
R3HDM1Q15032 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
R3HDM1Q15032 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.83■□□□□ 0.6
R3HDM1Q15032 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
R3HDM1Q15032 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
R3HDM1Q15032 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC18.83■□□□□ 0.6
R3HDM1Q15032 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
R3HDM1Q15032 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC18.83■□□□□ 0.6
R3HDM1Q15032 GNG10P1-201ENST00000452289 199 ntBASIC18.83■□□□□ 0.6
R3HDM1Q15032 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC18.83■□□□□ 0.6
R3HDM1Q15032 AC092612.1-201ENST00000514501 998 ntBASIC18.83■□□□□ 0.6
R3HDM1Q15032 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC18.83■□□□□ 0.6
R3HDM1Q15032 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
R3HDM1Q15032 AL118522.1-201ENST00000611368 560 ntBASIC18.83■□□□□ 0.6
R3HDM1Q15032 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC18.83■□□□□ 0.6
R3HDM1Q15032 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC18.83■□□□□ 0.6
R3HDM1Q15032 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC18.83■□□□□ 0.6
R3HDM1Q15032 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC18.83■□□□□ 0.6
R3HDM1Q15032 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3HDM1Q15032 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3HDM1Q15032 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3HDM1Q15032 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
R3HDM1Q15032 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3HDM1Q15032 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3HDM1Q15032 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3HDM1Q15032 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3HDM1Q15032 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.82■□□□□ 0.6
R3HDM1Q15032 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
R3HDM1Q15032 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3HDM1Q15032 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
R3HDM1Q15032 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
R3HDM1Q15032 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
R3HDM1Q15032 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.82■□□□□ 0.6
R3HDM1Q15032 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
R3HDM1Q15032 AL138725.1-201ENST00000407347 1314 ntBASIC18.82■□□□□ 0.6
R3HDM1Q15032 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3HDM1Q15032 RN7SKP230-201ENST00000365642 335 ntBASIC18.82■□□□□ 0.6
R3HDM1Q15032 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
R3HDM1Q15032 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC18.82■□□□□ 0.6
R3HDM1Q15032 ERP29P1-201ENST00000442902 706 ntBASIC18.82■□□□□ 0.6
R3HDM1Q15032 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC18.82■□□□□ 0.6
R3HDM1Q15032 DUX4L50-201ENST00000455245 715 ntBASIC18.82■□□□□ 0.6
R3HDM1Q15032 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3HDM1Q15032 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC18.82■□□□□ 0.6
R3HDM1Q15032 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC18.82■□□□□ 0.6
R3HDM1Q15032 AC068831.5-201ENST00000557387 328 ntBASIC18.82■□□□□ 0.6
R3HDM1Q15032 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC18.82■□□□□ 0.6
R3HDM1Q15032 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
R3HDM1Q15032 AC254633.1-201ENST00000606790 345 ntBASIC18.82■□□□□ 0.6
R3HDM1Q15032 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3HDM1Q15032 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3HDM1Q15032 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3HDM1Q15032 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3HDM1Q15032 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3HDM1Q15032 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
R3HDM1Q15032 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
R3HDM1Q15032 AC018629.1-201ENST00000623381 1736 ntBASIC18.82■□□□□ 0.6
R3HDM1Q15032 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3HDM1Q15032 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC18.82■□□□□ 0.6
R3HDM1Q15032 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3HDM1Q15032 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
R3HDM1Q15032 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
R3HDM1Q15032 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3HDM1Q15032 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3HDM1Q15032 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3HDM1Q15032 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
R3HDM1Q15032 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3HDM1Q15032 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
R3HDM1Q15032 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3HDM1Q15032 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
R3HDM1Q15032 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
R3HDM1Q15032 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC18.81■□□□□ 0.6
R3HDM1Q15032 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3HDM1Q15032 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
R3HDM1Q15032 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
R3HDM1Q15032 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3HDM1Q15032 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3HDM1Q15032 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
R3HDM1Q15032 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3HDM1Q15032 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
R3HDM1Q15032 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
R3HDM1Q15032 OLA1P2-201ENST00000395519 1264 ntBASIC18.81■□□□□ 0.6
R3HDM1Q15032 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3HDM1Q15032 XBP1P1-201ENST00000436573 652 ntBASIC18.81■□□□□ 0.6
R3HDM1Q15032 CSNK1G2P1-201ENST00000442675 955 ntBASIC18.81■□□□□ 0.6
R3HDM1Q15032 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC18.81■□□□□ 0.6
R3HDM1Q15032 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC18.81■□□□□ 0.6
R3HDM1Q15032 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC18.81■□□□□ 0.6
R3HDM1Q15032 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC18.81■□□□□ 0.6
R3HDM1Q15032 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
R3HDM1Q15032 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC18.81■□□□□ 0.6
R3HDM1Q15032 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
R3HDM1Q15032 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC18.81■□□□□ 0.6
R3HDM1Q15032 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
R3HDM1Q15032 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
R3HDM1Q15032 AC139713.2-201ENST00000641328 2723 ntBASIC18.81■□□□□ 0.6
R3HDM1Q15032 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.81■□□□□ 0.6
R3HDM1Q15032 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
R3HDM1Q15032 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.81■□□□□ 0.6
R3HDM1Q15032 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms