Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.77□□□□□ -0.21
SCN1BQ07699 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.77□□□□□ -0.21
SCN1BQ07699 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.77□□□□□ -0.21
SCN1BQ07699 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCN1BQ07699 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.77□□□□□ -0.21
SCN1BQ07699 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
SCN1BQ07699 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
SCN1BQ07699 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCN1BQ07699 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
SCN1BQ07699 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.77□□□□□ -0.21
SCN1BQ07699 PEG13-201ENST00000631594 5667 ntBASIC13.77□□□□□ -0.21
SCN1BQ07699 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.21
SCN1BQ07699 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SCN1BQ07699 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SCN1BQ07699 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.76□□□□□ -0.21
SCN1BQ07699 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SCN1BQ07699 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SCN1BQ07699 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SCN1BQ07699 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SCN1BQ07699 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.76□□□□□ -0.21
SCN1BQ07699 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SCN1BQ07699 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.76□□□□□ -0.21
SCN1BQ07699 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
SCN1BQ07699 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SCN1BQ07699 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SCN1BQ07699 AC127383.1-201ENST00000444697 1800 ntBASIC13.76□□□□□ -0.21
SCN1BQ07699 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SCN1BQ07699 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SCN1BQ07699 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.76□□□□□ -0.21
SCN1BQ07699 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SCN1BQ07699 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.76□□□□□ -0.21
SCN1BQ07699 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.76□□□□□ -0.21
SCN1BQ07699 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SCN1BQ07699 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SCN1BQ07699 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.76□□□□□ -0.21
SCN1BQ07699 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SCN1BQ07699 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SCN1BQ07699 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SCN1BQ07699 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SCN1BQ07699 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SCN1BQ07699 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SCN1BQ07699 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.76□□□□□ -0.21
SCN1BQ07699 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.76□□□□□ -0.21
SCN1BQ07699 AL645939.2-201ENST00000427340 991 ntBASIC13.76□□□□□ -0.21
SCN1BQ07699 AC140658.5-201ENST00000438532 169 ntBASIC13.76□□□□□ -0.21
SCN1BQ07699 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SCN1BQ07699 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.76□□□□□ -0.21
SCN1BQ07699 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SCN1BQ07699 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.76□□□□□ -0.21
SCN1BQ07699 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.76□□□□□ -0.21
SCN1BQ07699 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.76□□□□□ -0.21
SCN1BQ07699 AC145285.3-201ENST00000564603 959 ntBASIC13.76□□□□□ -0.21
SCN1BQ07699 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.76□□□□□ -0.21
SCN1BQ07699 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SCN1BQ07699 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.76□□□□□ -0.21
SCN1BQ07699 AL078644.1-201ENST00000609881 752 ntBASIC13.76□□□□□ -0.21
SCN1BQ07699 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
SCN1BQ07699 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SCN1BQ07699 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SCN1BQ07699 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SCN1BQ07699 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SCN1BQ07699 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SCN1BQ07699 AC089987.1-201ENST00000551654 2209 ntBASIC13.76□□□□□ -0.21
SCN1BQ07699 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.76□□□□□ -0.21
SCN1BQ07699 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SCN1BQ07699 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SCN1BQ07699 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SCN1BQ07699 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SCN1BQ07699 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SCN1BQ07699 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SCN1BQ07699 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.76□□□□□ -0.21
SCN1BQ07699 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SCN1BQ07699 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
SCN1BQ07699 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SCN1BQ07699 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SCN1BQ07699 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SCN1BQ07699 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SCN1BQ07699 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.75□□□□□ -0.21
SCN1BQ07699 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SCN1BQ07699 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SCN1BQ07699 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SCN1BQ07699 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.75□□□□□ -0.21
SCN1BQ07699 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SCN1BQ07699 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.75□□□□□ -0.21
SCN1BQ07699 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SCN1BQ07699 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
SCN1BQ07699 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
SCN1BQ07699 RNA5SP416-201ENST00000516838 111 ntBASIC13.75□□□□□ -0.21
SCN1BQ07699 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.75□□□□□ -0.21
SCN1BQ07699 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.75□□□□□ -0.21
SCN1BQ07699 AC109635.5-201ENST00000533593 962 ntBASIC13.75□□□□□ -0.21
SCN1BQ07699 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.75□□□□□ -0.21
SCN1BQ07699 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.75□□□□□ -0.21
SCN1BQ07699 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.75□□□□□ -0.21
SCN1BQ07699 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
SCN1BQ07699 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.75□□□□□ -0.21
SCN1BQ07699 AC120114.3-201ENST00000611923 658 ntBASIC13.75□□□□□ -0.21
SCN1BQ07699 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.75□□□□□ -0.21
SCN1BQ07699 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SCN1BQ07699 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms