Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC9.15□□□□□ -0.95
HSPG2P98160 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC9.15□□□□□ -0.95
HSPG2P98160 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC9.15□□□□□ -0.95
HSPG2P98160 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC9.15□□□□□ -0.95
HSPG2P98160 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC9.15□□□□□ -0.95
HSPG2P98160 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC9.14□□□□□ -0.95
HSPG2P98160 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC9.14□□□□□ -0.95
HSPG2P98160 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 FLJ38576-201ENST00000623820 2459 ntBASIC9.14□□□□□ -0.95
HSPG2P98160 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC9.14□□□□□ -0.95
HSPG2P98160 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC9.14□□□□□ -0.95
HSPG2P98160 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
HSPG2P98160 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC9.14□□□□□ -0.95
HSPG2P98160 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC9.14□□□□□ -0.95
HSPG2P98160 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
HSPG2P98160 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC9.14□□□□□ -0.95
HSPG2P98160 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
HSPG2P98160 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
HSPG2P98160 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
HSPG2P98160 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
HSPG2P98160 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
HSPG2P98160 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC9.14□□□□□ -0.95
HSPG2P98160 AC092580.1-201ENST00000433998 658 ntBASIC9.14□□□□□ -0.95
HSPG2P98160 RPL3P5-201ENST00000441645 1232 ntBASIC9.14□□□□□ -0.95
HSPG2P98160 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC9.14□□□□□ -0.95
HSPG2P98160 AC010503.4-201ENST00000615487 688 ntBASIC9.14□□□□□ -0.95
HSPG2P98160 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
HSPG2P98160 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC9.14□□□□□ -0.95
HSPG2P98160 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC9.14□□□□□ -0.95
HSPG2P98160 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC9.14□□□□□ -0.95
HSPG2P98160 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
HSPG2P98160 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC9.14□□□□□ -0.95
HSPG2P98160 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC9.14□□□□□ -0.95
HSPG2P98160 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 CA12-203ENST00000422263 2556 ntTSL 2 BASIC9.14□□□□□ -0.95
HSPG2P98160 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
HSPG2P98160 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
HSPG2P98160 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 REXO1L4P-201ENST00000605109 1937 ntBASIC9.14□□□□□ -0.95
HSPG2P98160 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC9.14□□□□□ -0.95
HSPG2P98160 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC9.14□□□□□ -0.95
HSPG2P98160 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 JTB-202ENST00000356648 1040 ntTSL 2 BASIC9.14□□□□□ -0.95
HSPG2P98160 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC9.14□□□□□ -0.95
HSPG2P98160 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC9.14□□□□□ -0.95
HSPG2P98160 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC9.14□□□□□ -0.95
HSPG2P98160 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC9.14□□□□□ -0.95
HSPG2P98160 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC9.14□□□□□ -0.95
HSPG2P98160 TPT1P6-201ENST00000458298 514 ntBASIC9.14□□□□□ -0.95
HSPG2P98160 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC9.14□□□□□ -0.95
HSPG2P98160 AC090820.1-201ENST00000519722 591 ntBASIC9.14□□□□□ -0.95
HSPG2P98160 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC9.14□□□□□ -0.95
HSPG2P98160 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC9.14□□□□□ -0.95
HSPG2P98160 AC254633.1-201ENST00000606790 345 ntBASIC9.14□□□□□ -0.95
HSPG2P98160 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC9.14□□□□□ -0.95
HSPG2P98160 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC9.14□□□□□ -0.95
HSPG2P98160 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC9.14□□□□□ -0.95
HSPG2P98160 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC9.14□□□□□ -0.95
HSPG2P98160 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC9.14□□□□□ -0.95
HSPG2P98160 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC9.14□□□□□ -0.95
HSPG2P98160 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC9.14□□□□□ -0.95
HSPG2P98160 RN7SL300P-201ENST00000582522 318 ntBASIC9.14□□□□□ -0.95
HSPG2P98160 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC9.14□□□□□ -0.95
HSPG2P98160 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC9.14□□□□□ -0.95
HSPG2P98160 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
HSPG2P98160 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC9.13□□□□□ -0.95
HSPG2P98160 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC9.13□□□□□ -0.95
HSPG2P98160 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC9.13□□□□□ -0.95
HSPG2P98160 AC012508.2-201ENST00000567613 1472 ntBASIC9.13□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms