Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.09□□□□□ -0.15
CDC42P60953 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.09□□□□□ -0.15
CDC42P60953 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDC42P60953 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.09□□□□□ -0.15
CDC42P60953 AC012508.2-201ENST00000567613 1472 ntBASIC14.09□□□□□ -0.15
CDC42P60953 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDC42P60953 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.09□□□□□ -0.15
CDC42P60953 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDC42P60953 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDC42P60953 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDC42P60953 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDC42P60953 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDC42P60953 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.09□□□□□ -0.15
CDC42P60953 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDC42P60953 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDC42P60953 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
CDC42P60953 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDC42P60953 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.09□□□□□ -0.15
CDC42P60953 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDC42P60953 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDC42P60953 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CDC42P60953 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CDC42P60953 AC010327.5-201ENST00000586923 3061 ntBASIC14.09□□□□□ -0.15
CDC42P60953 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDC42P60953 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CDC42P60953 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CDC42P60953 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CDC42P60953 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CDC42P60953 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CDC42P60953 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
CDC42P60953 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
CDC42P60953 AC018442.1-201ENST00000421439 2061 ntBASIC14.08□□□□□ -0.15
CDC42P60953 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CDC42P60953 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.08□□□□□ -0.16
CDC42P60953 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC42P60953 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC42P60953 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CDC42P60953 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CDC42P60953 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.08□□□□□ -0.16
CDC42P60953 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC42P60953 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC42P60953 AL359881.3-201ENST00000602640 1721 ntBASIC14.08□□□□□ -0.16
CDC42P60953 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC42P60953 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC42P60953 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC42P60953 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC42P60953 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.08□□□□□ -0.16
CDC42P60953 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC42P60953 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC42P60953 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CDC42P60953 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.08□□□□□ -0.16
CDC42P60953 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CDC42P60953 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.08□□□□□ -0.16
CDC42P60953 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.08□□□□□ -0.16
CDC42P60953 IGHV3-22-201ENST00000520721 359 ntBASIC14.08□□□□□ -0.16
CDC42P60953 AL135744.1-201ENST00000565098 629 ntBASIC14.08□□□□□ -0.16
CDC42P60953 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.08□□□□□ -0.16
CDC42P60953 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.08□□□□□ -0.16
CDC42P60953 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.08□□□□□ -0.16
CDC42P60953 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CDC42P60953 AC064836.3-201ENST00000607928 673 ntBASIC14.08□□□□□ -0.16
CDC42P60953 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC42P60953 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
CDC42P60953 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC42P60953 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC42P60953 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CDC42P60953 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CDC42P60953 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
CDC42P60953 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
CDC42P60953 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC42P60953 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CDC42P60953 AC092135.3-201ENST00000624151 1846 ntBASIC14.08□□□□□ -0.16
CDC42P60953 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CDC42P60953 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CDC42P60953 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CDC42P60953 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC42P60953 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CDC42P60953 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42P60953 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42P60953 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42P60953 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.07□□□□□ -0.16
CDC42P60953 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42P60953 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.07□□□□□ -0.16
CDC42P60953 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42P60953 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42P60953 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42P60953 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42P60953 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42P60953 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42P60953 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
CDC42P60953 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CDC42P60953 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CDC42P60953 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.07□□□□□ -0.16
CDC42P60953 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.07□□□□□ -0.16
CDC42P60953 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42P60953 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CDC42P60953 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42P60953 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.07□□□□□ -0.16
CDC42P60953 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.07□□□□□ -0.16
CDC42P60953 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms