Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PSMD4P55036 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PSMD4P55036 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PSMD4P55036 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PSMD4P55036 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PSMD4P55036 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PSMD4P55036 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
PSMD4P55036 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.33□□□□□ -0.11
PSMD4P55036 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PSMD4P55036 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.33□□□□□ -0.11
PSMD4P55036 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PSMD4P55036 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PSMD4P55036 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.33□□□□□ -0.11
PSMD4P55036 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
PSMD4P55036 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.33□□□□□ -0.12
PSMD4P55036 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.33□□□□□ -0.12
PSMD4P55036 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PSMD4P55036 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
PSMD4P55036 AC023024.2-201ENST00000623561 1993 ntBASIC14.33□□□□□ -0.12
PSMD4P55036 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PSMD4P55036 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PSMD4P55036 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PSMD4P55036 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PSMD4P55036 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PSMD4P55036 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
PSMD4P55036 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PSMD4P55036 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PSMD4P55036 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PSMD4P55036 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.33□□□□□ -0.12
PSMD4P55036 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PSMD4P55036 GHSR-202ENST00000427970 912 ntBASIC14.33□□□□□ -0.12
PSMD4P55036 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.33□□□□□ -0.12
PSMD4P55036 DFFBP1-201ENST00000433250 979 ntBASIC14.33□□□□□ -0.12
PSMD4P55036 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.33□□□□□ -0.12
PSMD4P55036 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.33□□□□□ -0.12
PSMD4P55036 BCRP1-201ENST00000444246 691 ntBASIC14.33□□□□□ -0.12
PSMD4P55036 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PSMD4P55036 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.33□□□□□ -0.12
PSMD4P55036 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PSMD4P55036 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.33□□□□□ -0.12
PSMD4P55036 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.33□□□□□ -0.12
PSMD4P55036 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.33□□□□□ -0.12
PSMD4P55036 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.33□□□□□ -0.12
PSMD4P55036 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
PSMD4P55036 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.33□□□□□ -0.12
PSMD4P55036 AC025181.2-201ENST00000606994 802 ntBASIC14.33□□□□□ -0.12
PSMD4P55036 AC099568.2-201ENST00000609194 695 ntBASIC14.33□□□□□ -0.12
PSMD4P55036 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.33□□□□□ -0.12
PSMD4P55036 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.33□□□□□ -0.12
PSMD4P55036 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PSMD4P55036 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
PSMD4P55036 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PSMD4P55036 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PSMD4P55036 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PSMD4P55036 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PSMD4P55036 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PSMD4P55036 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PSMD4P55036 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
PSMD4P55036 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PSMD4P55036 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PSMD4P55036 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PSMD4P55036 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.32□□□□□ -0.12
PSMD4P55036 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
PSMD4P55036 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.32□□□□□ -0.12
PSMD4P55036 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PSMD4P55036 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.32□□□□□ -0.12
PSMD4P55036 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PSMD4P55036 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PSMD4P55036 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.32□□□□□ -0.12
PSMD4P55036 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PSMD4P55036 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PSMD4P55036 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.32□□□□□ -0.12
PSMD4P55036 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.32□□□□□ -0.12
PSMD4P55036 FAM86LP-201ENST00000478302 853 ntBASIC14.32□□□□□ -0.12
PSMD4P55036 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.32□□□□□ -0.12
PSMD4P55036 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.32□□□□□ -0.12
PSMD4P55036 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.32□□□□□ -0.12
PSMD4P55036 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
PSMD4P55036 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.32□□□□□ -0.12
PSMD4P55036 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
PSMD4P55036 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.32□□□□□ -0.12
PSMD4P55036 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PSMD4P55036 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PSMD4P55036 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PSMD4P55036 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PSMD4P55036 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PSMD4P55036 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PSMD4P55036 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PSMD4P55036 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PSMD4P55036 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PSMD4P55036 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PSMD4P55036 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.32□□□□□ -0.12
PSMD4P55036 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.32□□□□□ -0.12
PSMD4P55036 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PSMD4P55036 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PSMD4P55036 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PSMD4P55036 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PSMD4P55036 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.32□□□□□ -0.12
PSMD4P55036 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.32□□□□□ -0.12
PSMD4P55036 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms